Gene Shew185_2626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2626 
Symbol 
ID5372041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp3135039 
End bp3135710 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content48% 
IMG OID640830850 
Productcarboxylesterase 
Protein accessionYP_001366824 
Protein GI153001143 
COG category[R] General function prediction only 
COG ID[COG0400] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00000180149 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTTT CTCTTGAGCG TATTGTCGTT GAACCTAAGA CGCCTGCTAC AGCCGTGGTT 
ATTTGGTTAC ATGGATTAGG GGATTCGGGT GCCGGATTTG CCCCCATTGT GCCTGCATTA 
GCTTTACCTG CCGATCATGC TATCCGGTTT ATTTTCCCCC ATGCACCGGA GCAAGCCGTT 
ACCATCAATG GCGGCTACGT CATGCGTGCT TGGTACGATA TTAAAAGCAT GGATTTGCAC 
GACAGAGCTG ATATGCAAGG CGTGCTTGAG TCGGAGAAAA GGGTTGCCGC ATTAATTAAC 
GAACAAATCG CGGCGGGTAT TGCGAGCGAG CGTATCGTAT TAGCAGGATT CAGTCAGGGC 
GGAGTTATGA GTTTATTCTC TGGACTGCGT TTCCCCGAGC AACTTGCAGG GATTATGGCA 
CTGTCTTGCT ATTTACCGAC GGGCGATGTA TTACCCGCTG AATTAAGCGT AGCGAATCGC 
AATACACCCA TATTACAGCA ACACGGTCTA CAGGATGATG TAGTGCCATT ATCCGCTGGA 
ACATTAGCCA AAGAAGCCTT AGTTATGGGC GGTTATAATG TGGTGTGGCA GACTTATCCT 
ATGCCGCATT CAGTGATCCC TGCGCAGTTA AAAGAGATTT CTAAGTGGTT ATTACAGCGA 
TTTGAAATGT AG
 
Protein sequence
MSVSLERIVV EPKTPATAVV IWLHGLGDSG AGFAPIVPAL ALPADHAIRF IFPHAPEQAV 
TINGGYVMRA WYDIKSMDLH DRADMQGVLE SEKRVAALIN EQIAAGIASE RIVLAGFSQG 
GVMSLFSGLR FPEQLAGIMA LSCYLPTGDV LPAELSVANR NTPILQQHGL QDDVVPLSAG 
TLAKEALVMG GYNVVWQTYP MPHSVIPAQL KEISKWLLQR FEM