| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2549 |
|---|
| Symbol | |
|---|
| ID | 5369871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 3047110 |
|---|
| End bp | 3049323 |
|---|
| Gene Length | 2214 bp |
|---|
| Protein Length | 737 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640830761 |
|---|
| Product | molydopterin dinucleotide-binding region |
|---|
| Protein accession | YP_001366748 |
|---|
| Protein GI | 153001067 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.573816 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCG ATAGACGCAC GTTTTTGCAG GGAGCTGCAG CAAGCGCTGT GCTGTCCTCT
CTGTCAGGGT TAACCCCCGG TATTGCAAAT GCTAAAGAAC CGGGAGCTAA TACGGGACTA
TTAGCAAAAC GAGAAGGGGA GATAAAGTAC CACACTTGCC AACGTAACTG CGCTGACCGC
TGTCTGCTCA AGTTTACGGT GCAAAATGGC CGTATGACCT ATGTAGAGGG AGCTTCAGAG
ATGAAGAAGA TGGGCACATC TCCCTGCGTT AAAGGCCACG CCTACGTACA ATACACCTAT
GCGGCGGATC GTATTCTCCA CCCCATGGAA CGCGCGGGCA AAAAAGGCGA AGGCAAATGG
CGCCGTATCT CTTGGGATGA AGCCTATGCC AAAATTGCTA GCCGACTGCA GCAGATCATT
AAAGACCACG GAGCCGATTC AATTTTGCCC TATAGCTACT CAGGTCATGA GGGGGTTATC
GGTAAATACG GCGGACCAAG CCGTTTCTTT AATGCTATTG GTGCACGCAA GCTTGACCGA
AAGGTTTGTG TATTCGCCGC TTATGAGGGC TTAAAGTCGG TTACTGGTAC CTACCAAGGA
CCCGATCCCT ACGACAATAT CTATACCAAC TGCTATATTT CTTGGGGGCA AAATGAAACC
GCCACCAATG TGCATGGCAT CAAGTTCATT AACCAAGCGC GCGACAAAGG TGCCAAACTG
TTAGTAGTTA ACCCTATTCG CACACCTATC GCCTCACAAG CAGATATCTG GTTGCAACCT
AGACCCAGTA CCGATACCCA TTTGGCTTCA GGCATCATGA AGTATCTGAT TGAGCACGAC
TTGGCCGATC TCGAGTTTAT CAAGGCAAAC ACCTTGGGTT ACGAGCAACT GATTATACGC
CTCAATGAGA TGAGCTATGA AGAGATTGAG CGTGTCACTG GTGTACCAAC AGCCAAGATG
TTTGAGTTTG CTAAAGTCTA TGGTGAATCA GAGCTTTCTG TATTGCGCTT AGGCTACGGT
ATGCAACGTA ACTTCAACGG TGCTCGTATG TCACGGGCCA TCGCAATGAT GCACGCTGTT
GCAGGCCAAT ATGGAAAGAT TGGTAATGGC TTTATTTACG ACAACACCCA AGCAGATGAC
AGTTTAAACT ACAGTAAAGG TCGTGCCGAC CATATTCACC CTAACCCAGA CACAGTGGGC
CATGTGAACA TGACAGAAAT TGCCAAAGCG CTCGATCCTG AAAACCCTAT AGCCTATGGG
AAACCGATCA AACCGATTAA GGCGGTCATT AACTACAATG GTAACTTTGT CTCGGTTGCA
CCCGATTCAA ATGCCTGCCG CCGTGGCGCC ATGCGCGATG ATCTGTTCTT GGTTGTCCAT
GACTTCTTGA TGACAGATAC TGCTGAATTA GCTGATATCA TTGTGCCTTC CACCACCCAG
TTTGAGTTCC CAGACATGGG CACAGACTAC AACTGTTACC ATATGCAAAC CTCTGAAAAA
GTTATTGAGC CGTTAGGTGA ATCTAAAGAT AACTGGATCT TCTTTAAAGA GTTAGGTGCC
CATATGGGAC TCGACCGATT CCCCGAGATG CGCGTTGATT ACGAGCAGAT ACTACGTGAC
TTCCTTGACA CCGAAGAGCC TGCCTTTAGA CACAACAACA TTACTTATGA GCAGATCATT
CGCGACAAAT TTGTCACCGT CTATGAGCAA CGGCCTTACT TCGGCGATGG CAAATATAAG
ACAGACAGTG GCAAGATTGA GTTCTATTCA GAGATGATGA AAGAGGCTGG TTTCCACCCA
GTTATTGACT TCGGATTACC TGAAGATGAG ATGCTCCCTG AAGAGAAAAA CTTGCCATTC
CGTTTACTGT CACCTGCGAT TCCGCAACGC GCAAACAGCG CCTTCTATAA CGTGAAGTAT
ATTCGTAACT TCCCAGCGTA TTTTGCCAAG ATTAACACTG AAGATGCGGC AGAGTTAGGG
ATTAATAATA ACGACAGAGT CAGACTCAAT AACCAACGAG GCGAAGCCTT TTTTATTGCT
CAGGTATCGA CCCAAGTCGT TCGCGGTACC GTGATGGCAC CTAAAAATAA CTGGCGCCGC
ATGGACCCTC AAGGTAAAGC AAGCTGTACC AATAACCTGA CCACTGACAC CCTGACCGAT
ATGGGCGGCT GCTCTGCATA TCATTCTACC CGTGTCGCAC TCACCAAAGC CTAA
|
|---|
| Protein sequence | MKIDRRTFLQ GAAASAVLSS LSGLTPGIAN AKEPGANTGL LAKREGEIKY HTCQRNCADR
CLLKFTVQNG RMTYVEGASE MKKMGTSPCV KGHAYVQYTY AADRILHPME RAGKKGEGKW
RRISWDEAYA KIASRLQQII KDHGADSILP YSYSGHEGVI GKYGGPSRFF NAIGARKLDR
KVCVFAAYEG LKSVTGTYQG PDPYDNIYTN CYISWGQNET ATNVHGIKFI NQARDKGAKL
LVVNPIRTPI ASQADIWLQP RPSTDTHLAS GIMKYLIEHD LADLEFIKAN TLGYEQLIIR
LNEMSYEEIE RVTGVPTAKM FEFAKVYGES ELSVLRLGYG MQRNFNGARM SRAIAMMHAV
AGQYGKIGNG FIYDNTQADD SLNYSKGRAD HIHPNPDTVG HVNMTEIAKA LDPENPIAYG
KPIKPIKAVI NYNGNFVSVA PDSNACRRGA MRDDLFLVVH DFLMTDTAEL ADIIVPSTTQ
FEFPDMGTDY NCYHMQTSEK VIEPLGESKD NWIFFKELGA HMGLDRFPEM RVDYEQILRD
FLDTEEPAFR HNNITYEQII RDKFVTVYEQ RPYFGDGKYK TDSGKIEFYS EMMKEAGFHP
VIDFGLPEDE MLPEEKNLPF RLLSPAIPQR ANSAFYNVKY IRNFPAYFAK INTEDAAELG
INNNDRVRLN NQRGEAFFIA QVSTQVVRGT VMAPKNNWRR MDPQGKASCT NNLTTDTLTD
MGGCSAYHST RVALTKA
|
|---|
| |