Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2525 |
Symbol | |
ID | 5369613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3017019 |
End bp | 3017891 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640830738 |
Product | isocitrate dehydrogenase (NADP(+)) |
Protein accession | YP_001366725 |
Protein GI | 153001044 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.4236 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACTGT TTGTCAAAGA TTTAACTGTG ATCGATTTTT CCTATTTGTG CCCAAAGCGC GGCATGGTGG GAGAGAGTTG GATTGTCGAT GTTCTGCTTG AGGGCGGATT AGACGAGCAA AACATGGTGC TCGATTTTGC TAAGGTGAAA CGCACCATCA AGCAGACCAT AGATGCGGTG GCCGATCATC GTTTACTTGT GCCTACGGCC TGCAGCAGTG TGCGTTGGCA GCAACAGGGC GATAGAGTGT GGATGGATTT TGATAGCCAG TTAGGTGAAA TCCATTTGGC CTGTCCTTCC CAAGCCTTTG CCTTAGTGCC GACCGAACAA ATTGATATTC CAAGCGTGAA TGCTTTTTTA CAGAAAGCGT TACGCGAAGC CTTACCTAAG AATGTCGAAG GGATCACGCT CACTTTGAGA CATGAAATCC TCGATACGCC TTATTATCAT TACAGCCATG GTTTACGTAA ACATGATGGT AATTGCCAGC GTATCGCCCA TGGACATCGT AGCCCAATTC ATGTGTTTGA GAATGGCAGC CCAGCACCAA AGTGGGATGA GTATTGGGCC AAGCGCTGGC ACGATATTTA TTTAGGCAGT GAAGAGGATT TGGTTTCTGT TGACACCCTG AATTTATCGT CGCAAACGCG GATCACCGAT GACAGTCATT ATGGTTTCCA TTACCAAGCG CCCCAAGGGG ATTTCCAATT GGCGATGCCA AAGGAAGGCT GTGATTTAAT TCCCCACGAC ACGACGGTTG AGTTGTTAGC CGACTATATT GCCACGACAC TCGTCGCTAA AGTGCCTGGT AGTCAGTTTA AAGTGGTGGC ATTTGAAGGT GTGGGTAAAG GCGCGATTGT GTCTAAGGGA TAA
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Protein sequence | MQLFVKDLTV IDFSYLCPKR GMVGESWIVD VLLEGGLDEQ NMVLDFAKVK RTIKQTIDAV ADHRLLVPTA CSSVRWQQQG DRVWMDFDSQ LGEIHLACPS QAFALVPTEQ IDIPSVNAFL QKALREALPK NVEGITLTLR HEILDTPYYH YSHGLRKHDG NCQRIAHGHR SPIHVFENGS PAPKWDEYWA KRWHDIYLGS EEDLVSVDTL NLSSQTRITD DSHYGFHYQA PQGDFQLAMP KEGCDLIPHD TTVELLADYI ATTLVAKVPG SQFKVVAFEG VGKGAIVSKG
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