Gene Shew185_2506 details

Gene Information

• Locus tag: Shew185_2506
• Symbol: sucC
• ID: 5370967
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: -
• Start bp: 2991646
• End bp: 2992812
• Gene Length: 1167 bp
• Protein Length: 388 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640830719
• Product: succinyl-CoA synthetase subunit beta
• Protein accession: YP_001366706
• Protein GI: 153001025
• COG category: [C] Energy production and conversion
• COG ID: [COG0045] Succinyl-CoA synthetase, beta subunit
• TIGRFAM ID: [TIGR01016] succinyl-CoA synthetase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00062173
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTGC ATGAGTATCA GGCAAAATCC TTATTTGCCG AATATGGTTT ACCAGTGTCA 
GAAGGTTTTG CATGTGATAC AGCCCAAGAA GCTGTAGAAG CGGCAGGCCA TATTGGCGGA 
AATTTATGGG TTGTTAAGTG TCAAGTACAC GCTGGCGGCC GCGGTAAAGC GGGTGGCGTT 
AAAGTCACTG GCGATAAAGA AGAAATCAGA GCCTTTGCCG AACACTGGTT AGGCAAAAAT 
CTGGTGACTT ATCAAACTGA TGAGAAAGGT CAGCCAGTTG CTAAAATTTT AGTAGAAAGC 
TGCACCGACA TCGCTAACGA ACTGTACCTA GGTGCCGTTG TTGACCGCGC GACTCGTCGC 
GTTGTGTTCA TGGCGTCGAC TGAAGGTGGT GTTGAAATTG AGAAAGTGGC AGAAGAAACG 
CCAGAACTCA TCCACACTGC AATCATCGAT CCTTTGACTG GTCCACAAGG TTATCAAGCA 
CGTGATCTTG GCTTCAAGTT AGGTTTAAAC CCAACTCAAA TGAAGCAGTT CACTAAGATT 
TTCATGGGTC TGGCGACTAT GTTCGTTGAT CATGATTTCG CATTGCTTGA AATCAACCCA 
CTGGTTATTA CTACTGAAGG CAACCTACAC TGCCTAGACG GTAAAATCGG TATCGACGGT 
AACGCACTTT ATCGTCAACC AAAAATCAAA GGCATGCACG ATCCATCACA GGATGATGCC 
CGCGAAGCTC ACGCTGCTAA GTTCGAACTG AACTATGTAG CATTAGACGG TAACGTTGGC 
TGTATGGTGA ACGGTGCTGG TCTGGCTATG GGTACTATGG ATATCGTTAA CTTGCACGGT 
GGCAAGCCAG CGAACTTCCT AGACGTAGGC GGCGGCGCGA CTAAAGAACG TGTAGCAGAA 
GCATTCAAAA TCATTCTGTC TGACAGCAAT GTGAAAGCAG TTCTGGTTAA CATTTTCGGC 
GGTATCGTAC GTTGTGACAT GATCGCAGAA GGTATCATCG GCGCGGTTAA AGAAGTGGGC 
GTTAAAGTAC CTGTTGTGGT TCGTTTAGAA GGTACTAACG CTGAACTTGG CCGTGAAGTA 
TTAGCTAAAT CAGGTCTTGA TATCATTGCA GCTACCAGTC TGACTGACGC GGCTGAGCAA 
GTTGTTAAAG CTGCGGAGGG CAAATAA 

 

Protein sequence

MNLHEYQAKS LFAEYGLPVS EGFACDTAQE AVEAAGHIGG NLWVVKCQVH AGGRGKAGGV 
KVTGDKEEIR AFAEHWLGKN LVTYQTDEKG QPVAKILVES CTDIANELYL GAVVDRATRR 
VVFMASTEGG VEIEKVAEET PELIHTAIID PLTGPQGYQA RDLGFKLGLN PTQMKQFTKI 
FMGLATMFVD HDFALLEINP LVITTEGNLH CLDGKIGIDG NALYRQPKIK GMHDPSQDDA 
REAHAAKFEL NYVALDGNVG CMVNGAGLAM GTMDIVNLHG GKPANFLDVG GGATKERVAE 
AFKIILSDSN VKAVLVNIFG GIVRCDMIAE GIIGAVKEVG VKVPVVVRLE GTNAELGREV 
LAKSGLDIIA ATSLTDAAEQ VVKAAEGK