| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2501 |
|---|
| Symbol | |
|---|
| ID | 5370713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 2987834 |
|---|
| End bp | 2988565 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640830714 |
|---|
| Product | NAD-dependent deacetylase |
|---|
| Protein accession | YP_001366701 |
|---|
| Protein GI | 153001020 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000275677 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACCAGC AAATTGTGGT GTTAACCGGC GCAGGGATCT CTGCTGAGTC GGGATTACGC
ACCTTTCGCG ATCAAGATGG TCTGTGGGAA GAACATCATA TTGAAGACGT GGCTACGCCA
GAAGGGTATG AACGTGATGC TGAGCTTGTG GAACGCTTTT ACAATAGTCG TTGGCAGCAA
TTGCACAGTG GCACAGTTGA GCCCAATGCG GCGCACCTTG CCTTGGCAAA GTTAGAGGCA
GAATTTCAAG GCCAGTTATT GATCGTGACC CAGAATATTG ATGATTTGCA TGAGCGTGCG
GGTTCACGTC GATTGCTGCA CATGCATGGC GAGCTATCCA AAGGTCGCTG CCCGCGCTCA
CGTCAGACCT TTATTCTGCG TGAGCCTTTT GGTGTAGATA ATTGTTGTAC CTGCTGTATT
CCTGCCCAGC GTTTACGCCC CCATGTGGTA TGGTTTGGCG AAATGCCCTT AGGGATGGAT
CGTATCCACG ATGCGCTGGA TAAGTGCGAC TTGTTTATTG CCATTGGCAC CTCTGGCACT
GTGTATCCTG CCGCGGGCTT TGTGGATACC GCTAACCATC ACGGCGCGCA AACGGTAGAA
GTGAATATGA TGGCACCCGA TAGACACAGT CAGTTCCAGT ATCATCTCAC TGGCAAAGCG
GGGGAGTTAG TGCCTCAGTT GGTCGATACT ATTTTAGCGG GCCGAGTGAT TGGCAGTGAG
TCGAACACAT GA
|
|---|
| Protein sequence | MYQQIVVLTG AGISAESGLR TFRDQDGLWE EHHIEDVATP EGYERDAELV ERFYNSRWQQ
LHSGTVEPNA AHLALAKLEA EFQGQLLIVT QNIDDLHERA GSRRLLHMHG ELSKGRCPRS
RQTFILREPF GVDNCCTCCI PAQRLRPHVV WFGEMPLGMD RIHDALDKCD LFIAIGTSGT
VYPAAGFVDT ANHHGAQTVE VNMMAPDRHS QFQYHLTGKA GELVPQLVDT ILAGRVIGSE
SNT
|
|---|
| |