Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2495 |
Symbol | |
ID | 5370612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 2981873 |
End bp | 2983222 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640830708 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001366695 |
Protein GI | 153001014 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.796582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACTAA GATTAAAATT TAAGAAACGT CTGCTGACGC GGATGTTTCT CACCTCGCTA TCGATTATTG CCTTAGTGGG TTTTGGTCTC GCATGGATGG TTAATATTCT GCATGCGCAA AATAGCTATA ACGAAGAAAC CGCACAACTC ATTGCCGAAA TTCCCCAAGT CGCCGCCGAA TTGCGGGAGC ACGATCTCAT CCCCGATACC AGTGCGTGGC TGGAGGAAAA TAATAAGCAA GAACGTTATG TGATTGCGAG TTGCGATGAA AAATTTAAAC AAGTTTGGAC TTCATCCCTC GCAGTAGACC GTGGCTTATT TGATACTTGC GAGCGTTTTA ACGAAATTCG CAACGATTCT CCGCCCTATT ATCTTACTAT GGCCGATGAC AGAGGTTACT TCGTCTATTT GCTCGCGGTG GAAATTGCTA GCGTACATTA CAATTTGCTC GTCCTCAAAG ATGCCGCTAA ACTCGAGCAG GAATACAGTA AGTTCAGTAA ACGCACTTAT ATTCGACTCG CCATGGTATT AGCCTTAGCG TTAATTCTAT TGGTCAGCGC CGCCTATTGG GGAATGCGCC CCTTAGTACG GATGCAGAAT GAACTGCAAT CGATTAACCA AGGTAAGAGT AAATCACTTT CAGAAGGCTA TCCTGTTGAA CTCGAAGGGG TAACCCAAGC ACTCAACCAA ATGCTGCAAC AATCGAGCGC CCAACAACAA CGCTATCAAA ATGCCATGAA TGACTTAGCA CACAGTCTTA AGACCCGCTT AGCCGCTGTG CATGCCATCA CAGATGACGC CAGTTTGAGT AAACAATCGG CGAGCGAAAA GATCATGGAA CAAGTCAGCC AGATGGATCA GCTGGTCAAA TATCAATTAA AACGCGCCAT GTTAGGCCGC CAAGGCCTGA AGCAAGAACA GACTGTGATT GCGCCCTTAG TCGATCAATT AGCGCAAATG CTATTTAAGA TTTACCGCGA TAAGCAAGTG CAGTTCTCAG CGAGCATTTC CCCTTCCTTA ATGTTTCCCG GCAACAAGGG CGACTTGATG GAGCTGTGTG GCAACCTGAT GGAAAACGCT TTCCGCTTAT GTATCAGCCA AGTGCATGTA TCGGCTAAGA TTAGTTCACA AGGTGAGTTT GAACTTATCG TCGAAGATGA TGGCCCAGGT GTCGAAGAAA GCTTAAGACA AAAGATTATC CAACGCGGCG TGCGAGCCGA TACCCAGTCA CCAGGACAAG GTATCGGATT AGCCGTCTGT GATGAAATCG TTCACAGCTA CGGTGGTAGT TTAAAAATTG AGGAAAGCCG CTTAGAAGGT GCACTCTTTA GGATCCGTAT CCCTGTTTAA
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Protein sequence | MQLRLKFKKR LLTRMFLTSL SIIALVGFGL AWMVNILHAQ NSYNEETAQL IAEIPQVAAE LREHDLIPDT SAWLEENNKQ ERYVIASCDE KFKQVWTSSL AVDRGLFDTC ERFNEIRNDS PPYYLTMADD RGYFVYLLAV EIASVHYNLL VLKDAAKLEQ EYSKFSKRTY IRLAMVLALA LILLVSAAYW GMRPLVRMQN ELQSINQGKS KSLSEGYPVE LEGVTQALNQ MLQQSSAQQQ RYQNAMNDLA HSLKTRLAAV HAITDDASLS KQSASEKIME QVSQMDQLVK YQLKRAMLGR QGLKQEQTVI APLVDQLAQM LFKIYRDKQV QFSASISPSL MFPGNKGDLM ELCGNLMENA FRLCISQVHV SAKISSQGEF ELIVEDDGPG VEESLRQKII QRGVRADTQS PGQGIGLAVC DEIVHSYGGS LKIEESRLEG ALFRIRIPV
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