Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2491 |
Symbol | |
ID | 5370424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2975296 |
End bp | 2978925 |
Gene Length | 3630 bp |
Protein Length | 1209 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640830704 |
Product | Ig domain-containing protein |
Protein accession | YP_001366691 |
Protein GI | 153001010 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGTCAG CGTATAAGGT TTTTCTCGCA GGATTGTGTT CATTTTTTTT AATTGCATGT GGTGGAGGAG GCAGCATCTC CGATGATGGT GGTACAACGC CGACGCCTGG TGTCGTCACT GTCACTCTTA GTATTTCTAA TAGCGATAGT GTTTCTGTCG CTACACCTGC GGAAGTTAAA GCAACGGTTG TGGATTCCAA GACTGGACCT CTAGCAGGTA TTGTAGTTTC ATTTAAATTA GATAATGACG CTTTAGGCTC TTTTACTCCC TCAACGGGGA CGCAATTAAC GAACTCATCT GGCGTTGCAA CGGTTAAGCT TGATACTGCA ACTTTAGCGG GTGCTGGAAA TGTAACTGCG AGTGTTGCGA GTGGTGCTTC CATAACCAAG GGCTTTTATT CAAAAGGAGA TGGTGTTGTT CAGCCTGGAA CGGGGAATAA ACTTAAACTA TCACTACAAA ATGCCCAAGG ACAAACTGTA ACAAAAATCA GTTCTGCAGT ACCTGGTACT GTTAGTGCTA TTTATACTAA TGGTTCAGAT GAACCATTAG TCGGTAAGGT TATCACTTTC ACTTCAAACT TAGGTAAATT TTCACCGCAA TCAGGCACTG CACTTACCAA TGCTCAAGGA CTTGCTAAAA TAGCAATTAC TGCTGGTTCA GTTGCTGGGG CTGGTAATAT TATTGCTAAA GTTGATGAAA ATATTGAGTC ACTTGGATTT GAGACATCAG GAGATGAAGT TGTTGTTAAG CCAATTGATG CGTATAGCAT TGCGCTAACA ATTTTTGATT CACAGGGCCA AGAATTAAGA AATATTAGTC ATGTTGTTCC TGGAACTGTA ATTGCAACTT TATTGAAAGA CGGTGCTCCG ACTAGCTATC AAACAGTCGT ATTCAATTTG ACGGGACAAG GTACATTAAA TCCTTCTTCG GGAACGGCAT TAACGGACTT AAATGGTCAT GCTTCTGTGA CTTTAATTAC TGGAACAAAT GCTGGTGCAG GGTCTGTTAC TGCTAGCTTC TCCCTTGATA ATGAAACAAT AACGGATAGC TTCAACTTTG AAGTTGCTGG CGATGCACCT GGTGGAAATG GCGAGGCTAA TTCTTTATCA ATTCAATTGA CAAATAGCCA AACGGGTTTG CCAACCACTA ATGTCAGTGC AGCACAACCG AGCAAAGTAA CGGTTACTTT AGTTGATAAA GATGCCACTC CATTGGTTGG TAAAGTGGTG AGTTTTAGTA GTTCCTTAGG AAACTTCCTT CCAACGAAAG GAACCGCTTT AACAGATTCA ATTGGCCGAG CTTCTATTAC TTTAACCGCA GGTAGTATTG AAGGTGCTGG TGAAGTCACT GCAAGTTATG GTACTGCGAA GGCTATTGTC GGTTTTGTAA CCGCTGGTGA TGATATAGAC CCTATAGAAG CAAGCCCTGA AATCAGTTTT GATATATATG ATTGTAATGG TGTAGCTGCA TGGGATAAGA CACTAAAGAA CTTTGAAGTT TGTAAGATAA CCGACAATAT TACAAACGAT AAACCTGGTA TTATTGGTGC TAAAGTTACG CGTTCTGGCA GTACGCAAGC TCTACAACAA GTGCTTGTTA CTGCCGCGAC AACCTTAGGA GCTATTAGCC CTAATTCGGG GACAGCCATC ACGAATGTTG ACGGTAAAGC GATTCTTGAC TTGTACGCAA ATGGTAACGT TGGGGCTGGC GAAGTCTCTT TAAAAGTGAA AGATGCTACC TCAACTAAAG CGTTTGAAAT TGGTAGAGTA AATATTAGCC TCGATATAAA AACAAGTGTA GGCAATAACT CTTTACCAGC AGGTGGTTCT ACTATTGTTG AAGTCACGGT TTTCAATCCT GATGGTTCAT TATCGACAGG TCAACCTTTC ACTCTAGAAT TTTCATCAGA ATGTGTTGCT GCTGGTAAAG CTGTCATTGA TTCCCCTATA GTTACTAACG CTGGTAAAGG TTATTCGACT TATCGTTCAA CAGGATGTAG TGGATTAGAT ACAATATCTG TTTCAGCTGT TACTGGTGGC GGCTCAGTGT CTAAGACAAC TCAAATTACA GTTGATACAG TAAAAGTTGG AGCTATTGAG TTTGTTTCTG CAACACCTAA TCAGTTGGCT CTGAGTGGCA CTGGTGGAAT TGCAGGAGTA GGTGCACGTA GTGAGACATC TGTTGTTCAG TTCAAGTTAT TAAATGAAAT TGGCCAACCT GCTAGCCAGC AAAGAGTTTG TTTTGAATTG AGTACCGAAG TAGGAGGTAT GACGTTATCA CCATCACCTC TTGCTGAGGA TTATTTGGCA TGTAGCAATA TGCCTCAGCC TGGAGATGCT GAGTACCCTT CAGACCTGAG TTTACCTAAT AAATATGCAG TGGCTTACAC TGATGCATTT GGCCAAGTTT CTGTTACGGT AAAAGCTGGT GATATTCCTA CACCTGTAAA AGTATTTGCT TTATGGTCTG GTAGTACTGG CAACGGTCAT GATGCAACTA TTTCTAATAT TTCAGATGAG TTAGTTGTAT CTACAGGACT TGCTGATAAT GATAGTTTCT CTTTATCTGC CACCATTCTT AATCCTGAAG GATGGGATCA TGATAATGAA CAGTCAACAA TCAATGTGTT AGCTGCGGAT CATTTTAACA ACCTTGTACC TTCTGGTACT CGAATCAGTT TTAGAACTGA AGGCGGTGGT ATTGATAGTT CATGTGTTAC TGGCTCCAAA GATAATGGTG CAGGTGTATT AATTCCTAAT GGTGGTTGTT CTGTGACTTG GCGAAGTCAA GATTCTCGTC CTTTCAAAGG GACGACTGTG ATTTGCCCTA ATGGTGGATT TAATGGAATT ATTACTCCGC CATGTACGGG TAATAGTTAT GCTCGCTATC TTGACGGTAC TAATTCCGTT ATTGCAGAAC CACGTCCAGG TAGAACGACA ATTACGGCTT ACGCGATAGG TGAAGAGAGT TTTGTTGATT TAAATGGAAA TGGGTTATTT GATAAAGATG AAGATTTTAG TGATTTATCT GAAGCGTTCA CAGATCATAA CGAAGATGGT AAATATCGAG GTTCACCATT ACCTGCAGGA GCGGTTAAAG AAGAATTTAT TGATTACAAT GTAAGCGGTT CTTTTGATGG TGCAGATGGT AAGTATACTG GTTTACTTTG TGCGCAAGGT TCTGAGGCAA ACTGTACTGA TACTGGGAGT GATAATTTTA AAGCTCAGTT GAATGTATTT AGAAATCTTC CATTAGTCAT GTCTGGCAGT ACTCCATTCA TGAGACTGGT GAATATAGAT GCAGTAACTG GAAATATTAC CCCAGTGCAA CCGATTGATT TAACAGTCGA TGCACCACAA ACCATTTATT TATTCCTTTC AGATTTAAAC AATAATACGC TTCCGTTTGG AACTACGATA ACTGGAACTG CAGATAATGG CGTATTAAGT TCAGTTACCT CAACTTATAC AATAGGAAAT AATACCTCTA ATAAACCATT GCTATATCCT TTTACTATTG GTTTAGAAAC ATCTCCAAAT AAGAAAACAA TTGGACAGCT AACGATTACG GTTAAAACCC CTTTGGGTGA ACCATTAGCT GTGTCTGTCA ACGTGATAGA TGCTGGTTGA
|
Protein sequence | MKSAYKVFLA GLCSFFLIAC GGGGSISDDG GTTPTPGVVT VTLSISNSDS VSVATPAEVK ATVVDSKTGP LAGIVVSFKL DNDALGSFTP STGTQLTNSS GVATVKLDTA TLAGAGNVTA SVASGASITK GFYSKGDGVV QPGTGNKLKL SLQNAQGQTV TKISSAVPGT VSAIYTNGSD EPLVGKVITF TSNLGKFSPQ SGTALTNAQG LAKIAITAGS VAGAGNIIAK VDENIESLGF ETSGDEVVVK PIDAYSIALT IFDSQGQELR NISHVVPGTV IATLLKDGAP TSYQTVVFNL TGQGTLNPSS GTALTDLNGH ASVTLITGTN AGAGSVTASF SLDNETITDS FNFEVAGDAP GGNGEANSLS IQLTNSQTGL PTTNVSAAQP SKVTVTLVDK DATPLVGKVV SFSSSLGNFL PTKGTALTDS IGRASITLTA GSIEGAGEVT ASYGTAKAIV GFVTAGDDID PIEASPEISF DIYDCNGVAA WDKTLKNFEV CKITDNITND KPGIIGAKVT RSGSTQALQQ VLVTAATTLG AISPNSGTAI TNVDGKAILD LYANGNVGAG EVSLKVKDAT STKAFEIGRV NISLDIKTSV GNNSLPAGGS TIVEVTVFNP DGSLSTGQPF TLEFSSECVA AGKAVIDSPI VTNAGKGYST YRSTGCSGLD TISVSAVTGG GSVSKTTQIT VDTVKVGAIE FVSATPNQLA LSGTGGIAGV GARSETSVVQ FKLLNEIGQP ASQQRVCFEL STEVGGMTLS PSPLAEDYLA CSNMPQPGDA EYPSDLSLPN KYAVAYTDAF GQVSVTVKAG DIPTPVKVFA LWSGSTGNGH DATISNISDE LVVSTGLADN DSFSLSATIL NPEGWDHDNE QSTINVLAAD HFNNLVPSGT RISFRTEGGG IDSSCVTGSK DNGAGVLIPN GGCSVTWRSQ DSRPFKGTTV ICPNGGFNGI ITPPCTGNSY ARYLDGTNSV IAEPRPGRTT ITAYAIGEES FVDLNGNGLF DKDEDFSDLS EAFTDHNEDG KYRGSPLPAG AVKEEFIDYN VSGSFDGADG KYTGLLCAQG SEANCTDTGS DNFKAQLNVF RNLPLVMSGS TPFMRLVNID AVTGNITPVQ PIDLTVDAPQ TIYLFLSDLN NNTLPFGTTI TGTADNGVLS SVTSTYTIGN NTSNKPLLYP FTIGLETSPN KKTIGQLTIT VKTPLGEPLA VSVNVIDAG
|
| |