| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2489 |
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| Symbol | |
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| ID | 5370295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2970881 |
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| End bp | 2973523 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640830702 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001366689 |
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| Protein GI | 153001008 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.297791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAAAT CGCTAGTTAT TGTCGAATCA CCGGCCAAAG CTAAGACTAT TAATAAATAT
CTTGGCAAAG AATTCATCGT TAAATCGAGC GTAGGTCACA TCCGTGATCT GCCGACATCA
TCGACTTCAG AAGGCAATGA AAAGGTTAAA TCCGCTGCCG AAGTTAAGAA AATGTCGCCA
GAAGAAAAAG CTCAATATAA AAAGGTGAAA GATCAGCAAG CGCTGGTGTC TCGCATGGGC
GTAAACCCTG AAAAGGGCTG GGCGGCTAAG TATCAAATTT TGCCGGGCAA AGAAAAGGTC
GTTAAAGAGT TACAGGCACT TGCCGATTCT GCCGACCAAA TCTATCTCGC AACCGACTTA
GACCGTGAGG GAGAAGCTAT CGCCTGGCAT TTGCAAGAGG TGATTGGCGG TGATCCTTCA
CGGTATCAAC GTGTGGTTTT CAACGAAATT ACTAAGTCTG CGATTCAAGA CGCTTTTAGC
AAGCCGTCGA CACTCGACAC TAACATGGTT AATGCCCAGC AAGCTCGTCG CTTCTTAGAC
AGAGTTGTCG GTTTTATGGT GTCGCCACTG CTGTGGAAAA AAGTCGCTCG CGGTTTGTCC
GCTGGACGAG TGCAGTCGGT TGCTGTTCGC TTAGTGGTTG AACGTGAAAG CGAAATTAAA
GCCTTTGTGC CGGAAGAGTT CTGGGATGTA CATGCAGAGC TGAGTACGCC AGCCCAAGAA
GCCTTGCGGA TGGAAGTGGT TAAGCATTTA GATGCGGCCT TTAATCCCAT TAATGAACAG
CAAGCGATGG CGGCGGTTCA AGCGTTATCG GCGGCGAGTT TTACCGTGCT GGCCCGCGAA
GACAAAGCGA CCCAAAGCAA ACCTTCTGCC CCCTTTATTA CGTCGACATT GCAACAGGCG
GCGAGTACGC GCTTAGGTTT CGGTGTGAAG AAGACCATGA TGATGGCTCA GCGACTTTAT
GAAGCTGGTC ATATCACTTA TATGCGTACC GACTCGACCA ATTTGAGTCA AGAAGCCGTT
GAAAACTTGC GTGATATGAT TGCCAAAGAG TTTGGTGATA AATATCTACC CGCTGAACCC
ATTCGCTACG GTTCTAAAGA AGGCGCACAA GAGGCTCACG AAGCGATTCG TCCATCGAAC
GTCCATGTAC AAGCGGCAAC CTTATCGGAC ATGGAGCGTG ATGCCCAGCG CTTATATGAG
CTGATTTGGC GTCAGTTTGT GTCATGTCAG ATGACGCCAG CCCAATATGA TGCTACTAAG
TTGACCGTAA AAGCGGGTGA CTATGAGCTC AAAGCAACGG GACGTACTTT ACGTTTTGAT
GGTTGGACTC GCGTGCAAAC AGCACTCAAG AAGAAAAACG AAGAAGACAA TACGTTGCCA
TTTGTGGCAC AAGGCGATGT ATTAGCGTTA AAAGAGTTGC AACCTAAACA ACACTTTACT
AAACCGCCTG CACGATACAG CGAAGCCTCT TTAGTTAAAG AATTAGAAAA ACGCGGCATT
GGGCGACCAT CGACCTATGC AACTATTATT TCAACGATTC AAGATCGGGG TTATGTAAAA
GTTGAGAATC GTCGTTTTTA TGCCGAAAAA ATGGGCGAAA TTGTCAGCGA GCGATTAGTC
GGCAGTTTTG CTGATTTAAT GAGCTATGAC TTTACCGCCA GTATGGAGCA AACATTAGAC
GATGTGGCTC GCGGCGAATT AGATTGGAAA AAAGTGCTCG ATGGCTTCTA TGCTGACTTT
ACTAAGCAAT TAGAAAAAGC GGAGCTGGAT CCCGAAGAAG GTGGCATGCG TCTTAACCAA
ATGGTGATGA CGGATATCAA GTGCCCAACC TGTGGTCGCC CTATGGGGAT CCGCACGGGA
ACAACCGGTG TTTTCCTTGG TTGCTCTGGT TACGAATTAC CTCCCAAAGA GCGCTGTAAG
ACAACGATGA ACCTTACGCC TGGCGTTGAG GCGATTAGCG AAAACAGTGA AGATGCCGAG
ACTGATGCAC TGCGTGCGAA GCACCGCTGT AGTATTTGCG GCACAGCGAT GGACAGTTAC
CTAATTGATG AGAAGCGTAA GCTACACGTC TGTGGTAACA ACCCGATTTG TGAAGGCTAT
GAAGTCGAAG AAGGCCAATT CAAGATCAAA GGTTATGAAG GTCCGCTGAT TGAGTGTGAT
CGCTGTGGCC ACGACATGGA ACTGAAAAAC GGCCGTTTTG GTAAGTATTT TGGTTGTACC
AATAGCGAAT GTAAAAATAC GCGTAAATTA CTGAAGAACG GTGAGGCTGC GCCACCAAAA
GAAGATCCTA TCTATTTGCC TGATCTGAAA TGCAGCAAAT CGGATGCCCA TTTCGTATTA
CGTGATGGTG CAGCAGGGAT CTTCTTAGCG GCCAGTACCT TCCCTAAATC ACGGGAAACC
CGTGCGCCTC TGGTTGAGGA GCTGGTTCAA TACCGTGAGC TGCTATGGCC TAAGTATCAG
TATTTAGCGG ATGCGCCAGT CACTGATGAT GAAGGTAATA AGGCTGCGGT GAAGTTTAGC
CGTAAGACGA AAGAGCAATA CGTTGCGACT GAAGTCGACG GTAAAGCCAC TGGTTGGTCA
GCGCATTACG TTAATGGCAA GTGGGTGAGT GAGACTACCA AGAAAGCCAA GAAAAGCGCA
TAG
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| Protein sequence | MGKSLVIVES PAKAKTINKY LGKEFIVKSS VGHIRDLPTS STSEGNEKVK SAAEVKKMSP
EEKAQYKKVK DQQALVSRMG VNPEKGWAAK YQILPGKEKV VKELQALADS ADQIYLATDL
DREGEAIAWH LQEVIGGDPS RYQRVVFNEI TKSAIQDAFS KPSTLDTNMV NAQQARRFLD
RVVGFMVSPL LWKKVARGLS AGRVQSVAVR LVVERESEIK AFVPEEFWDV HAELSTPAQE
ALRMEVVKHL DAAFNPINEQ QAMAAVQALS AASFTVLARE DKATQSKPSA PFITSTLQQA
ASTRLGFGVK KTMMMAQRLY EAGHITYMRT DSTNLSQEAV ENLRDMIAKE FGDKYLPAEP
IRYGSKEGAQ EAHEAIRPSN VHVQAATLSD MERDAQRLYE LIWRQFVSCQ MTPAQYDATK
LTVKAGDYEL KATGRTLRFD GWTRVQTALK KKNEEDNTLP FVAQGDVLAL KELQPKQHFT
KPPARYSEAS LVKELEKRGI GRPSTYATII STIQDRGYVK VENRRFYAEK MGEIVSERLV
GSFADLMSYD FTASMEQTLD DVARGELDWK KVLDGFYADF TKQLEKAELD PEEGGMRLNQ
MVMTDIKCPT CGRPMGIRTG TTGVFLGCSG YELPPKERCK TTMNLTPGVE AISENSEDAE
TDALRAKHRC SICGTAMDSY LIDEKRKLHV CGNNPICEGY EVEEGQFKIK GYEGPLIECD
RCGHDMELKN GRFGKYFGCT NSECKNTRKL LKNGEAAPPK EDPIYLPDLK CSKSDAHFVL
RDGAAGIFLA ASTFPKSRET RAPLVEELVQ YRELLWPKYQ YLADAPVTDD EGNKAAVKFS
RKTKEQYVAT EVDGKATGWS AHYVNGKWVS ETTKKAKKSA
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