Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2484 |
Symbol | |
ID | 5369737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2963340 |
End bp | 2966723 |
Gene Length | 3384 bp |
Protein Length | 1127 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640830697 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001366684 |
Protein GI | 153001003 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3325] Chitinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.1184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTGTA ATATACCTTG GGTAATGAAG CAACAGCGAT TCGCGTGGTT AATGGCCACA GCTATGGCGG GTTTCAGTTA TTCTCAAACG GCTGCAGCAG TGAGTTGCCA AGACATAGCA GCTTGGAACA GTAGCCAAAT CTATGCAACC GTCACGCCTG TAACCTACGA TAATTATCTC TATCAAAATA AGTGGTGGAC CCAGAATGAA AACCCGAGCC AAACAGGGCA GTGGGGCGTA TGGGAAAACA AAGGCGTGTG TGATGGAGCG CAAAACCAAG CGCCTACACT GGTTATCTTG CAGCCGCAAA ACAATGTGAG TGTGAATTTA GGGGATGTTG TCGTGCTGCA GGCCGATGCA TCTGATGTTG ACGGTACTGT TGCGAGCGTA AATTGGTTTG CCAATGGTCA GGCGGTAACG AGCCCTTGGA CGACTAATGC GATCGGCATT GTTCAGCTTA AAGCGGTAGC GACCGATGAC AAAGGTGCGA CGACCGAGAA AAGTGTTGTG CTAACCGTTA TCAATGCTAC GAGTGAAAAC TTACCGCCTT CGACAGAAAT TTTGTCACCT CTCAATGACA GCGCTGTCAC TGTTAGCGAC TCAGTAACCA TTACTGCGAA TGCGAGTGAT CCTGATACGG GTGATAGCAT TACTAAAGTT GAGTTTTATC TTGATAGTCA ATTGATTGCG ACTGATAACA GTGCACCCTA TTCGGCAACG TCGCAGGCCG TTGGAGTCGG TGAGCATCAA ATACAAACCC GTGCCTACGA TAGTCACAAT GCCAGTTGCT TGTCGGCAAT CATCAAACTC AATGTTGTCG CAGCTAATCA AGCGCCAAGC GTGACATTAA CCGCGCCGCA GGCCAACTTT CAAACAGATT TAGGCACGGT GTTATCACTC GCAGCAACTG CGACTGACAG TGATGGCGAT GTGGCCAGCG TGCGCTTTTA TGCTAACGGT GTGCTCGTTG CTGAAGATGC AACCGCGCCA TACAGTGCAC AATGGACTAC CTTTGAAAAC GGCGACATTC GTTTCACCGC TGAGGCTATC GATAATCTTG GCCTGACAAC ATTATCAACC GCTGTCATCG GCCGAGTAGG TCAAGCACCA ACCGATAATG AGGCTTGCCG TCCTGAAGGT TTAGTGGGTG ATTCAGTCTA TTGCGATGTG TACGATGAAC AGGGCCGCGA AAAAATGGGT AGCGATCACG CCCGCCGCGT TATCGGTTAC TTTACTTCGT GGCGCACGGG TAAAAATGGC CAGCCGAGTT ATCTCGCAAG TGATATTCCG TGGGATAAAA TTACTCACAT CAATTATGCA TTTGCGCATA TTGATTCGAA TAACAAGGTC TCTATTGGCG ACCCCAATAG TGTCACGAAC GTGGCAACAG GATTAGGGTG GCCGGGCGTT GCAGGCGCTG AGATGGATCC CGAGTTTAAT TACAAAGGCC ATTTTAACTT ACTCAATAAG TATAAAAAAC GCCATCCAAA CGTTAAGACT TTAATCTCGA TTGGTGGCTG GGCTGAAACG GGCGGTTATT TTGATGATAA CGGTAATCGT GTTGCCAGTG GTGGTTTCTA TGAGATGACT CAGACGACGC AAGGGATTGA AACCTTTGCC GATTCTGTGG TGACGTTCTT ACGTACTTAC AGCTTTGATG GGGCGGATAT CGACTATGAG TACGCGACAT CAATGGCTAA ATCCGGTAAT CCTGATGATT TTTCGATGTC AGAGCCAAAG CGTGCGACCT TGTTTAAACA GTACGAACTA CTGATGAAAA CCCTGCGTGA AAAACTCGAT GCAGCCAGCA AGCAAGATGG TAAGCACTAT ATGTTGACCG TTGCTGCGCC AGCATCGGGC TATTTGTTAC GTGGGATGGA GGCGTATCAG ATGACCCGTT ATCTCGATTA CGTCAACATT ATGAGCTATG ACTTGCACGG CGCGTGGAAC GATTTTGTCG GTCACAATGC GGCGCTATTT GACACTGGTA CAGATGCAGA ACTTGCGCAT TGGGATGTTT ATAGTACGGC GCAATATGGC GGCATTGGTT ATCTCAATAC CGATTGGGCA TACCATTATT TCCGTGGTTC TATGCCGGCA GGGCGGATCA ATATCGGTAT TCCTTACTAC ACCCGTGGTT GGCAAAATGT AAGTGGTGGC ACCAACGGTC TATGGGGCTT AGCGGCATAT CCGGATCAAA CGGCTTGTCC TGTGGGTACG GGTGATGGGG CGTCAAACTG TGGTTACGGT GCTCAAGGAA TTGATAACCT CTGGCACGAT AGTGATGTAC GTGGCGATGA GATGTTCGCA GGCTCTAACC CTATGTGGCA TGCTAAAAAC TTGGAACTCG GTATCAGCGG CAGTTATTTA AGCCTTTATG GATTAGATCC GCAAACGAAT GTCGCCGATC GACTGACGGG TACCTATGAG CGCCACTACG ACGCTGTGGC AGAATCTTCA TGGTTATGGA ACCCGACCAA AAAGGTGTAT CTGTCTACTG AAGACGAGCA AGCTATGGCG CGTAAAGTGC AATATGTGGT CGATAACGGC ATTGGCGGCG TCATGTTCTG GGAATTAGCA GGTGACTTCG GCTGGCATCC AGAGCGTAAC AATGGTCAGG GTGAGTTCTT TGTGGGTGAT ACTATGACTA GCATTGCGTA CAACGGATTT GCGCAAGCAA CCCCGTATGG TAATCGCACC AGCAATCAGT TAATGCCATC ACAAACATTA GCCTTAACGG CAAGTTTATC TGGCTATAAA GTGGGCGACA GTAACTATCC GATTACGCCA ACCTTAACCA TCACCAATAA TAGCCAAGTG ACTATACCCG GCGGTGCTGA GTTTGAATTT GATATTTCAA CTTCAACTTC AGCCGACATT GCCGATCAAT CGGGTATGGG GTTAACTGTG GTAACGGATG GTTCCAATGT GGCAGGAAAT AACGTGGGCG GGTTGGAGAA TGATTTCCAC CATGTTCGCT TTATCTTGCC AACCTGGAAA AGTCTGGCAC CTGGGGCAAC GTTTGACGGC ACTATTAAGT ACTATTTGCC TGTCTCTATG CCATCAAACT TTACTGTGAG TTTTAATGGC ACTCGATATG GATTTGGTGC GGCGAGTTCC GTTGTTCCAC CTGTGGATTG TGCTGCAAAT CCAAGTTTAC CTGAATGCCA AGTACCTGTG GTGGATAGTT GTGAAGCGGC GAGTGTCGAT ACTGCGGGTA TTCCTGCTTA TCCAAATTTC CCGCAAAAGG ACTATCAGGG AAATCCAAGT CATGCAGCAA CGGGCGATCG GATGAAAAAC AGTAGCGCTG TTTACCAAGC TAAGTGGTGG ACCAACGCGG CACCTGGATC TTCTGCAGAT TGGGCGTTTG TGTGTAATCT ATAA
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Protein sequence | MICNIPWVMK QQRFAWLMAT AMAGFSYSQT AAAVSCQDIA AWNSSQIYAT VTPVTYDNYL YQNKWWTQNE NPSQTGQWGV WENKGVCDGA QNQAPTLVIL QPQNNVSVNL GDVVVLQADA SDVDGTVASV NWFANGQAVT SPWTTNAIGI VQLKAVATDD KGATTEKSVV LTVINATSEN LPPSTEILSP LNDSAVTVSD SVTITANASD PDTGDSITKV EFYLDSQLIA TDNSAPYSAT SQAVGVGEHQ IQTRAYDSHN ASCLSAIIKL NVVAANQAPS VTLTAPQANF QTDLGTVLSL AATATDSDGD VASVRFYANG VLVAEDATAP YSAQWTTFEN GDIRFTAEAI DNLGLTTLST AVIGRVGQAP TDNEACRPEG LVGDSVYCDV YDEQGREKMG SDHARRVIGY FTSWRTGKNG QPSYLASDIP WDKITHINYA FAHIDSNNKV SIGDPNSVTN VATGLGWPGV AGAEMDPEFN YKGHFNLLNK YKKRHPNVKT LISIGGWAET GGYFDDNGNR VASGGFYEMT QTTQGIETFA DSVVTFLRTY SFDGADIDYE YATSMAKSGN PDDFSMSEPK RATLFKQYEL LMKTLREKLD AASKQDGKHY MLTVAAPASG YLLRGMEAYQ MTRYLDYVNI MSYDLHGAWN DFVGHNAALF DTGTDAELAH WDVYSTAQYG GIGYLNTDWA YHYFRGSMPA GRINIGIPYY TRGWQNVSGG TNGLWGLAAY PDQTACPVGT GDGASNCGYG AQGIDNLWHD SDVRGDEMFA GSNPMWHAKN LELGISGSYL SLYGLDPQTN VADRLTGTYE RHYDAVAESS WLWNPTKKVY LSTEDEQAMA RKVQYVVDNG IGGVMFWELA GDFGWHPERN NGQGEFFVGD TMTSIAYNGF AQATPYGNRT SNQLMPSQTL ALTASLSGYK VGDSNYPITP TLTITNNSQV TIPGGAEFEF DISTSTSADI ADQSGMGLTV VTDGSNVAGN NVGGLENDFH HVRFILPTWK SLAPGATFDG TIKYYLPVSM PSNFTVSFNG TRYGFGAASS VVPPVDCAAN PSLPECQVPV VDSCEAASVD TAGIPAYPNF PQKDYQGNPS HAATGDRMKN SSAVYQAKWW TNAAPGSSAD WAFVCNL
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