| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2483 |
|---|
| Symbol | |
|---|
| ID | 5369736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 2962109 |
|---|
| End bp | 2963173 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640830696 |
|---|
| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| Protein accession | YP_001366683 |
|---|
| Protein GI | 153001002 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
|---|
| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0888756 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATAA AAACAGACGA ACTACGCACT TCCTTATTAG CAAAAGTCAT CTCACCTGCG
CAACTGGCAT CTGAGTTCCC ATTAACTCAA GATGCGGCCG ATTATCTGGT TCAGCAACGT
CGTGAAGTCG AAGCCATTAT TATGGGTGAA GATCAACGTC TTTTGGTGAT CATAGGCCCA
TGCTCAATAC ACGATACCAA AGCGGCATTA GATTATGCGC AGCGCTTAGC CGCATTACAT
CAAGAATTGA AAGATGATTT GTGCATTTTA ATGCGGGTCT ATTTTGAGAA ACCTCGCACG
ATTGTCGGCT GGAAAGGATT AATTTCTGAT CCCGATCTTG ATGGCAGTTT CGAGCCAAAC
AAAGGCTTAC GTATTGCTCG CGAGCTACTG CAACAAATCA CTGAATTAAA ATTACCTATT
GCCACCGAAT TTTTAGATAT GGTGAACGGT CAGTACATCG CCGATCTGAT TACTTGGGGC
GCAATTGGCG CACGCACCAC GGAAAGCCAA GTTCACCGTG AAATGGCCTC GGCACTGTCT
TGTCCTGTTG GTTTCAAAAA CGGTACCGAT GGCAATATCA ACATCGCCGT CGATGCAGTG
CGCGCCGCGC AAGTTCCGCA TATTTTCTAT TCACCGGATA AAGATGGCGC GATGGCGGTT
TATCGTACCC ACGGTAATCC GTTTGGTCAT ATCATTCTGC GCGGCGGCAA AACACCTAAT
TACCACGCCG ATGATATCGA AAAGGCACGG CAACAACTTG CCTCTGTTGG GGTCACTCAA
CGTATGGTGG TCGATTTCAG CCACGGTAAC AGTGAGAAGA ACCACCTTAA GCAGCTTAAC
GTGGCTGATG AAATCATGGC GCAAATGCGG GCAGGCAGCA CTGCCATCGC CGGTATTATG
GCTGAAAGCT TCTTACAGGA AGGCAACCAG AAAGTCGTTG CAGACCAACC ACTCTGTTAT
GGTCAAAGTA TTACCGATGC CTGCTTACAT TGGGAAGACT CAGAAGTCCT GCTGCATAAA
CTGGCAGCCG CTTCCCGCGA ACGAAAAGCA TTGCTAGCAA AATAA
|
|---|
| Protein sequence | MTIKTDELRT SLLAKVISPA QLASEFPLTQ DAADYLVQQR REVEAIIMGE DQRLLVIIGP
CSIHDTKAAL DYAQRLAALH QELKDDLCIL MRVYFEKPRT IVGWKGLISD PDLDGSFEPN
KGLRIARELL QQITELKLPI ATEFLDMVNG QYIADLITWG AIGARTTESQ VHREMASALS
CPVGFKNGTD GNINIAVDAV RAAQVPHIFY SPDKDGAMAV YRTHGNPFGH IILRGGKTPN
YHADDIEKAR QQLASVGVTQ RMVVDFSHGN SEKNHLKQLN VADEIMAQMR AGSTAIAGIM
AESFLQEGNQ KVVADQPLCY GQSITDACLH WEDSEVLLHK LAAASRERKA LLAK
|
|---|
| |