| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2478 |
|---|
| Symbol | |
|---|
| ID | 5369512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 2954322 |
|---|
| End bp | 2954738 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640830691 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001366678 |
|---|
| Protein GI | 153000997 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.795114 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAATCGTC ATGAAAGCTT AGGCTATCTT GTTTCCCACT TAAATATCGA GCTGCAAAAT
GAGCTTGATC TGCATCTTAA GCGATATCAA CTCGATATAA AACTGTGGCC TGTGCTGTTT
GCTTTGTGGC AAGAGGAGGG CATCAGCCAA ACTGAATTGT CTAAGCGTTG CGATGTGGCA
AATTACACTA TGACGCGCTT ACTCGATCAG TTGCAGGTAC AAGGTCTTAT TACCCGCCAT
CAAGAAGCCG ATAATCGGCG CGCCTTTCAA ATCTTTTTGA CCGATGAAGC CAAAGCGTTA
GAGCAAGATC TGATTTGCGA AGCTGAGCGG GTCAACGAAA AATTCCTGTC TAACCTCAGT
GATGAGGAGC AGCAGCAGTT CGTCTTACTA TTAAATAAAA TCAATCGCTT GGCTTAA
|
|---|
| Protein sequence | MNRHESLGYL VSHLNIELQN ELDLHLKRYQ LDIKLWPVLF ALWQEEGISQ TELSKRCDVA
NYTMTRLLDQ LQVQGLITRH QEADNRRAFQ IFLTDEAKAL EQDLICEAER VNEKFLSNLS
DEEQQQFVLL LNKINRLA
|
|---|
| |