| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2474 |
|---|
| Symbol | |
|---|
| ID | 5369380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 2950577 |
|---|
| End bp | 2951716 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640830687 |
|---|
| Product | cupin 4 family protein |
|---|
| Protein accession | YP_001366674 |
|---|
| Protein GI | 153000993 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2850] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.030086 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATACAC TCAATCTCGA TATCGCCCAG TTTCTTAGTG AATACTGGCA AAAGAAACCC
CTGCTGATCA AAAAAGCCTT TCCGCAGTTT GAAGATCCTA TCAGCGCCGA TGAACTAGCA
GGCCTTGCCT GTGAGGAAGA AATCTCTTCA CGTATCGTCG TCACCAAAGA CAATGATTGG
GAAGTGGTCC AAGGCCCGTT TGAGGATTAC GACAGCTATG GCGAAACCCA TTGGCAATTG
CTAGTGCAAG CAGTCAACCA TTGGTATCCC GATTCACAGC CATTAGTTGA AGCGCTGCGC
TTTCTACCTG ACTGGCGCTT CGATGATTTG ATGGCCTCAT TTGCAACCCC AAGTGGCGGC
GTAGGCCCAC ACGTCGATAA CTACGATGTG TTTATCATTC AAGGCGAAGG TGAGCGTCGC
TGGACTGTGG GCGACAATAC TCCGCAACAA CGCCGCGGTG GCAACCCAAA CTCGCCGCTG
GTTGAAGACT TCACCCCAAT TATCGATGTG GTGCTAGAAA AAGGCGACAT GCTTTATATT
CCGCCAGGTT TCCCGCATTG CGGCGAAACC CTAACTGTGG CAATGAGTTA CTCGATTGGT
TTTCGCGCCC CAAGCCAGCA AGAATTGGTC AGCGAAGTTG CCGATTATTT GCTCGACAAT
AACTTAGGTC AGCAGCGTTT CACCTCACAA ACTGAACCGA GTTCAGCGGG TATCGTCAGC
CAAGATCATC AAGTGGGCAT AATGTCACTC TTGAGTCAGC TGAGCCAAGA TCCCAATAGC
TACCAAATCG TGTTAGGTAA GCTACTCAGT CAAAACCGTT TCGAACTTGA TTTGTGTGAA
GGTGAAGAAG CTTACAGCAT TGAAGATTTG CAAGATGCCT TCGCCCAAGG TGCTGGCGTC
AGCCGTATCG GCGGTTTGAA AGTATTGCGC CTTGAAAATG ATGCCACGCC GCGATTATTC
ATCAATGGTG ACGTGCACGA ATTGCTCAAT ACACCGGCAG ACGTTATCGC ACAGTTGAGC
GATAACGTGA GCTTAAGCGC CGATGAAGCA ACTGAAATCT GTCAGCATGA AGAAGTTCAA
GCCTTACTGT TGAAACTCAT CAATCAAGGT TTCTTTTACT TAAGCGACAG CGAAGATTAA
|
|---|
| Protein sequence | MYTLNLDIAQ FLSEYWQKKP LLIKKAFPQF EDPISADELA GLACEEEISS RIVVTKDNDW
EVVQGPFEDY DSYGETHWQL LVQAVNHWYP DSQPLVEALR FLPDWRFDDL MASFATPSGG
VGPHVDNYDV FIIQGEGERR WTVGDNTPQQ RRGGNPNSPL VEDFTPIIDV VLEKGDMLYI
PPGFPHCGET LTVAMSYSIG FRAPSQQELV SEVADYLLDN NLGQQRFTSQ TEPSSAGIVS
QDHQVGIMSL LSQLSQDPNS YQIVLGKLLS QNRFELDLCE GEEAYSIEDL QDAFAQGAGV
SRIGGLKVLR LENDATPRLF INGDVHELLN TPADVIAQLS DNVSLSADEA TEICQHEEVQ
ALLLKLINQG FFYLSDSED
|
|---|
| |