Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2473 |
Symbol | |
ID | 5369379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 2949072 |
End bp | 2950442 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640830686 |
Product | adenylosuccinate lyase |
Protein accession | YP_001366673 |
Protein GI | 153000992 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0015] Adenylosuccinate lyase |
TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00166519 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTTT CCGCACTAAC TGCTATCTCT CCGGTAGACG GTCGTTATGG TAGTAAAACC GCTTCATTGA GAGGGATTTT CAGCGAGTTC GGTCTTACCA AGTACCGTGT TCAGGTTGAA ATCAATTGGC TAAAACTGTT AGCAGACTGC CCAGACATTA GCGAAGTGCC AACATTGAGC GCGTCAGCAA TCGCTGTGCT CGATGGCATT AAAGACAATT TCAACGAACA AGATGCGCTG CGTGTTAAGG CTATCGAAAG CACCACTAAC CACGATGTGA AAGCGGTTGA ATACTTCATC AAAGAAAAAA TCGCGGGCAA TAGCGAATTA GCCGCTGTGG GTGAGTTTGT TCACTTTGCC TGTACTTCCG AAGATATCAA CAACTTAAGC CACGGTTTAA TGTTGACTGA AGCCCGTGAG CAAGTATTAC TGCCATATTG CAACGAGTTG CTGACTGCGA TTAAAAAGCT GGCGATTGAA TATCGCTCTG TGCCATTAAT GTCACGCACC CATGGCCAAC CTGCTTCACC TTCGACACTC GGTAAAGAGA TGGCGAACGT AGCTATGCGT CTTGAGCGTC AAATCAAACA AATTGCCAAT GTTGAAATCA TGGGCAAACT GAACGGTGCC GTAGGTAACT ACAATGCTCA CCTGTCAGCC TACCCTGAAG TTAATTGGCA TGAACTGTCT GAGCGTTTTG TGACTAGCCT TGGCCTGCAC TGGAACGCCT ACACGACGCA AATCGAACCA CACGATTACA TTGCCGAACT GTTTGATGCG GTTGCCCGTT TCAACACTGT GCTGATTGAC TTTGACCGTG ACATTTGGGG TTACATTGCC CTAGGTCACT TCAAACAACG CACTATCGCC GGTGAAATCG GTTCATCGAC TATGCCGCAC AAAGTTAACC CAATCGATTT TGAAAACTCT GAGGGTAACT TAGGTATCGC TAACGCGCTG ATGCAACATT TAGCGTCTAA GCTGCCGTTA TCAAGATGGC AACGTGACTT AACTGACTCA ACTGTGCTGC GTAACTTAGG CGTAGGTATT GCCCATGCGT TGATCGCGTA TCAAGCGACC TTAAAAGGCA TCAGCAAGTT AGAAGTTAAC GAAGCGCACC TGCGTGATGA GTTAGATCAC AACTGGGAAG TGTTAGCAGA ACCAGTACAA ACTGTGATGC GTCGTTATGG CATTGAAAAA CCATACGAAA AGTTAAAAGA ACTGACGCGC GGTAAACGTA TCGACGCGCA GCAACTGTCA GTGTTTATTG ACGGACTTGA ATTACCAGAC TCAGTGAAAG CTGAACTGAA GAAAATGACG CCCGCCAATT ACATTGGTCG CGCCGAAACG TTTGTCGACG AACTGAAGTA A
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Protein sequence | MDLSALTAIS PVDGRYGSKT ASLRGIFSEF GLTKYRVQVE INWLKLLADC PDISEVPTLS ASAIAVLDGI KDNFNEQDAL RVKAIESTTN HDVKAVEYFI KEKIAGNSEL AAVGEFVHFA CTSEDINNLS HGLMLTEARE QVLLPYCNEL LTAIKKLAIE YRSVPLMSRT HGQPASPSTL GKEMANVAMR LERQIKQIAN VEIMGKLNGA VGNYNAHLSA YPEVNWHELS ERFVTSLGLH WNAYTTQIEP HDYIAELFDA VARFNTVLID FDRDIWGYIA LGHFKQRTIA GEIGSSTMPH KVNPIDFENS EGNLGIANAL MQHLASKLPL SRWQRDLTDS TVLRNLGVGI AHALIAYQAT LKGISKLEVN EAHLRDELDH NWEVLAEPVQ TVMRRYGIEK PYEKLKELTR GKRIDAQQLS VFIDGLELPD SVKAELKKMT PANYIGRAET FVDELK
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