Gene Shew185_2473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2473 
Symbol 
ID5369379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2949072 
End bp2950442 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content47% 
IMG OID640830686 
Productadenylosuccinate lyase 
Protein accessionYP_001366673 
Protein GI153000992 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0015] Adenylosuccinate lyase 
TIGRFAM ID[TIGR00928] adenylosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00166519 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTTT CCGCACTAAC TGCTATCTCT CCGGTAGACG GTCGTTATGG TAGTAAAACC 
GCTTCATTGA GAGGGATTTT CAGCGAGTTC GGTCTTACCA AGTACCGTGT TCAGGTTGAA
ATCAATTGGC TAAAACTGTT AGCAGACTGC CCAGACATTA GCGAAGTGCC AACATTGAGC
GCGTCAGCAA TCGCTGTGCT CGATGGCATT AAAGACAATT TCAACGAACA AGATGCGCTG
CGTGTTAAGG CTATCGAAAG CACCACTAAC CACGATGTGA AAGCGGTTGA ATACTTCATC
AAAGAAAAAA TCGCGGGCAA TAGCGAATTA GCCGCTGTGG GTGAGTTTGT TCACTTTGCC
TGTACTTCCG AAGATATCAA CAACTTAAGC CACGGTTTAA TGTTGACTGA AGCCCGTGAG
CAAGTATTAC TGCCATATTG CAACGAGTTG CTGACTGCGA TTAAAAAGCT GGCGATTGAA
TATCGCTCTG TGCCATTAAT GTCACGCACC CATGGCCAAC CTGCTTCACC TTCGACACTC
GGTAAAGAGA TGGCGAACGT AGCTATGCGT CTTGAGCGTC AAATCAAACA AATTGCCAAT
GTTGAAATCA TGGGCAAACT GAACGGTGCC GTAGGTAACT ACAATGCTCA CCTGTCAGCC
TACCCTGAAG TTAATTGGCA TGAACTGTCT GAGCGTTTTG TGACTAGCCT TGGCCTGCAC
TGGAACGCCT ACACGACGCA AATCGAACCA CACGATTACA TTGCCGAACT GTTTGATGCG
GTTGCCCGTT TCAACACTGT GCTGATTGAC TTTGACCGTG ACATTTGGGG TTACATTGCC
CTAGGTCACT TCAAACAACG CACTATCGCC GGTGAAATCG GTTCATCGAC TATGCCGCAC
AAAGTTAACC CAATCGATTT TGAAAACTCT GAGGGTAACT TAGGTATCGC TAACGCGCTG
ATGCAACATT TAGCGTCTAA GCTGCCGTTA TCAAGATGGC AACGTGACTT AACTGACTCA
ACTGTGCTGC GTAACTTAGG CGTAGGTATT GCCCATGCGT TGATCGCGTA TCAAGCGACC
TTAAAAGGCA TCAGCAAGTT AGAAGTTAAC GAAGCGCACC TGCGTGATGA GTTAGATCAC
AACTGGGAAG TGTTAGCAGA ACCAGTACAA ACTGTGATGC GTCGTTATGG CATTGAAAAA
CCATACGAAA AGTTAAAAGA ACTGACGCGC GGTAAACGTA TCGACGCGCA GCAACTGTCA
GTGTTTATTG ACGGACTTGA ATTACCAGAC TCAGTGAAAG CTGAACTGAA GAAAATGACG
CCCGCCAATT ACATTGGTCG CGCCGAAACG TTTGTCGACG AACTGAAGTA A
 
Protein sequence
MDLSALTAIS PVDGRYGSKT ASLRGIFSEF GLTKYRVQVE INWLKLLADC PDISEVPTLS 
ASAIAVLDGI KDNFNEQDAL RVKAIESTTN HDVKAVEYFI KEKIAGNSEL AAVGEFVHFA
CTSEDINNLS HGLMLTEARE QVLLPYCNEL LTAIKKLAIE YRSVPLMSRT HGQPASPSTL
GKEMANVAMR LERQIKQIAN VEIMGKLNGA VGNYNAHLSA YPEVNWHELS ERFVTSLGLH
WNAYTTQIEP HDYIAELFDA VARFNTVLID FDRDIWGYIA LGHFKQRTIA GEIGSSTMPH
KVNPIDFENS EGNLGIANAL MQHLASKLPL SRWQRDLTDS TVLRNLGVGI AHALIAYQAT
LKGISKLEVN EAHLRDELDH NWEVLAEPVQ TVMRRYGIEK PYEKLKELTR GKRIDAQQLS
VFIDGLELPD SVKAELKKMT PANYIGRAET FVDELK