| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2460 |
|---|
| Symbol | |
|---|
| ID | 5373019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 2936585 |
|---|
| End bp | 2937337 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640830673 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001366660 |
|---|
| Protein GI | 153000979 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0327] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00486] dinuclear metal center protein, YbgI/SA1388 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000153632 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACGGA CAGAATTAAC CCAATATTTA GCCGATTTTT TACATGTATC GGCGTTTAAA
GATTACGCGC CCAATGGGCT TCAGGTAGAA GGCAAGGATG AAATCTGCAC CATAGTGACG
GGCGTGACTG CATGTCAGGC TTTGATCGAT GAAGCGATTC GATTAAACGC CGATGCGATT
TTGGTCCATC ACGGCTTTTT TTGGAAGAAT GAGCCTGAAG TGATCACTGG CATGAAACAA
CGCCGGATTA AGGCACTGCT CAAGCATGAT ATTAATTTAT TTGGCTATCA TTTGCCCTTG
GACGCCCACC CAATGCTGGG TAATAACGCG ACCTTAGGCA GGCAACTTGG GATCGTCGAC
GCAGAAGCCA TCGAAGAGGT GGCTCAGGGG CTGCTGTGGC GTGGAAAACT TGATCTTGCG
GTTAGTGCTA GCGAATTTTC TCACACCCTT GAGGATGCGT TAGGCAGAGC CCCACTGCAC
ATAGGTGATG GCGATGCCAA GATCCAACAT TTAGCTTGGT GTACTGGCGG CGCGCAGGAC
TATATCGATG TTGCGGCGAG TTTAGGTGTG GATGCGTTTA TCAGTGGTGA AGTGTCCGAA
CGCACTTTCC ACAGTGCGGT GGAGCAGGGC ATACATTATT TTGCGGCGGG GCACCATGCG
ACCGAACGTT TCGGTATTCA AGCCTTAGGC CGTCATCTCG CCCGCGAGTT TGATCTCGTG
CACCATTTTG TGGATATCAC TAATCCGGTC TAA
|
|---|
| Protein sequence | MTRTELTQYL ADFLHVSAFK DYAPNGLQVE GKDEICTIVT GVTACQALID EAIRLNADAI
LVHHGFFWKN EPEVITGMKQ RRIKALLKHD INLFGYHLPL DAHPMLGNNA TLGRQLGIVD
AEAIEEVAQG LLWRGKLDLA VSASEFSHTL EDALGRAPLH IGDGDAKIQH LAWCTGGAQD
YIDVAASLGV DAFISGEVSE RTFHSAVEQG IHYFAAGHHA TERFGIQALG RHLAREFDLV
HHFVDITNPV
|
|---|
| |