| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2454 |
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| Symbol | |
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| ID | 5370893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2929764 |
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| End bp | 2930573 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640830667 |
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| Product | aminotransferase class IV |
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| Protein accession | YP_001366654 |
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| Protein GI | 153000973 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR03461] aminodeoxychorismate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00581034 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTTGGG TGAATGGCGC ATCGCAGGCG AGTGTCGATC CTTCCGATCG AGGGCTTGCC
TACGGTGATG GCCTGTTTGC GACTATGCGG ACAGGCGCTG AGGGGATTTT GTTTTTCAAC
GCCCATCAAG CTCGTTTAAC CGCAGGCGCC GCAAGGCTTG GGTTTCAATG GCAAATGAGT
GAAGCACTGC AACAGCAGCT TCATGCCTTA GCCATTGAAT ATCCACATCA TTGTATTAAG
TTAATCGTTA CCCGTGGTGT CGGTGGCCGT GGTTACACAC CACCAGAAAC GGTTAATCCT
ACCGAAATCG TCTCAGTTCA TGCTATCCCA AGCCATTATG CAAAGTGGCA GCAAGCGGGC
ATTTGCCTTA AAACCTCGTC GATACGATTG GGTTTGCAGC CCTTGTTGGC TGGGATGAAG
CATTTAAATC GACTCGAACA AGTCTTAATA AAATCCCACC CTTTACCTCA GGGGTTTGAT
GACTGGTTAG TTAACGATAT CGAAGACAAT GTGATTGAAT CTTCGATGGC GAATGTGTTT
TTTATCAAAG GCAATCGCGT TATAACCCCT TCATTAGCCC AGTGCGGCGT GGCGGGTGTG
ATGCGCGAAC AGGTTATGAT AGCCTTGCTT GAACAGAACA TGAATATCGA ATGTTTGCCC
GTTGGCGCCG AGCGTTTAAT TGAATTTGAC TCAGCGTTTA TCACTAACAG CGTTTTAGGA
ATTGTGGATG TGCTGGCGAT AGACTCGCTC AAGTTCAGCC GTGCTCCGAT TACCGCGCAA
CTTAGACAGA CACTTTCACT CACCCTATGA
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| Protein sequence | MFWVNGASQA SVDPSDRGLA YGDGLFATMR TGAEGILFFN AHQARLTAGA ARLGFQWQMS
EALQQQLHAL AIEYPHHCIK LIVTRGVGGR GYTPPETVNP TEIVSVHAIP SHYAKWQQAG
ICLKTSSIRL GLQPLLAGMK HLNRLEQVLI KSHPLPQGFD DWLVNDIEDN VIESSMANVF
FIKGNRVITP SLAQCGVAGV MREQVMIALL EQNMNIECLP VGAERLIEFD SAFITNSVLG
IVDVLAIDSL KFSRAPITAQ LRQTLSLTL
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