Gene Shew185_2451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2451 
Symbol 
ID5373480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2927131 
End bp2928087 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content49% 
IMG OID640830664 
ProductDNA polymerase III, delta prime subunit 
Protein accessionYP_001366651 
Protein GI153000970 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.135157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGCCG AGTCAGGTTT TACAGCTGCG GAATTACCTT GGCTCGAAGG GCCAAGACAG 
GCATTTTTAG CGCAACTCAC GCGGCAAAAA ATGCCCCATG CGCAGCTTGT CGGCATTGAT
TCTGCCTATG GTGGTGAGCT GCTGAGTGTG TTCATGGCGC GTGCGGCCAT GTGTTTGCAG
CCAACACCGG CGGGGGCCTG CGGTTTTTGT AAGTCTTGTC AGCTCTTTGA TGCGGGAAAT
CATCCCGATT TTTACCATAT TGCCGCCGAT GGCAATCAAA TTAAAGTCGA TCAAATTCGT
GAGCTTTGCA CACGTCTGAC GGCGACTGCC CAGCAAAGCG GTATGCGGGT GGCGATTATT
CACCATAGCG AGCGACTTAA CTCCGCTGCC GCCAACGCAC TCCTTAAAAC CCTTGAGGAG
CCAGGTAAAG ATACTTTACT GATATTGCAG TCGGATACGC CTGCACGTCT GATGGCGACG
GTCAGCAGCC GCTGCCAACG CATTCCCTTC GTTGTGCCAA GCCGAGAGAC CATCAAAAAC
TGGTTAGCGC AGCAATGTGA TATCCAAGAG GATGTCACTT GGTGCCTGAG TGTGGTGGGT
GGACCGCTAA AGTTGGCAGA GAGCTTGCAG TCTGAAGGTA GTCAACAGAG CCGTTATCAA
TCCTTGCTAC AGTTTCGCAA AGATTGGGCC CAAAGTTTGT CGTCTGGTCA TCTGTGTGCT
AGTTTGTTAA GTATAAGTGA ACAACAAATA ATTGATGTTC TTAAGGTTTT ATACCTGCTT
ATACGACAGG TGTTACTGAA AAATAGCCAC CAAGATGCGT TTATCCATGC GCAGCTCGGG
AACTTGGCGG CCAAGATCAT GGGAATGTGT CATAGCTTAA GCACAATGCC GAGCGTCAAT
TATCTGGCCT TGTGTCAAAG TTATGTCTTA GAATATAGAG AGATAACAAA TAAGTAA
 
Protein sequence
MVAESGFTAA ELPWLEGPRQ AFLAQLTRQK MPHAQLVGID SAYGGELLSV FMARAAMCLQ 
PTPAGACGFC KSCQLFDAGN HPDFYHIAAD GNQIKVDQIR ELCTRLTATA QQSGMRVAII
HHSERLNSAA ANALLKTLEE PGKDTLLILQ SDTPARLMAT VSSRCQRIPF VVPSRETIKN
WLAQQCDIQE DVTWCLSVVG GPLKLAESLQ SEGSQQSRYQ SLLQFRKDWA QSLSSGHLCA
SLLSISEQQI IDVLKVLYLL IRQVLLKNSH QDAFIHAQLG NLAAKIMGMC HSLSTMPSVN
YLALCQSYVL EYREITNK