| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2441 |
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| Symbol | |
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| ID | 5370458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2916674 |
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| End bp | 2917306 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640830654 |
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| Product | putative solute/DNA competence effector |
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| Protein accession | YP_001366641 |
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| Protein GI | 153000960 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3109] Activator of osmoprotectant transporter ProP |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.254744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGAAT CAACAGAAAA GTTGACCGAC ACCAATGCAA TTTTGGCGTA TTTGTATGAA
ACATTTCCTT TGTGCTTTAT TGCTGAAGGT GAAACTAAGC CATTAAAAAT CGGATTGTTT
CAAGATTTGG CTGAAAGGTT GGCTGATGAT TCTAAAGTCA GTAAAACTCA GCTCAGAGTT
GCCTTAAGAC GTTACACCAG CAGCTGGCGC TATTTGAAGT GCGTTAAAGC GGGCGCACAA
CGCGTTAATC TGGATGGCGA ACCTTGCGGC GAGTTAGAGC AAGAGCACAT TGACCATGCT
CAAGCCATGT TGAAAGAGAG TCAGGATAAA GCGAAAGCGA AACGTGCAGC ACTCGCACCT
AAGCCTGCGG CGAAGAAAGC ACCTAAAAAG GTGGCTGTTC CTCAACGTGC TAAAACTGAG
CGTCCTGCTA AGCCTGCGCC TAAAGCTGCA GCGCCAGTCG TAAATTATGT CCAAGCACAA
TTGACTGATT TAACGAAAAA ACAACGCGTC AATGTTAAGT TAGGTATGAC ACCCGTAGCC
GGTGTGATTA CTGATATTAA CAAGGAAGAT ATTCATGTTC AGCTTGATAG TGGCCTAACG
ATTAAAGTTA GAGCAGAACA TATCCTGCTG TAA
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| Protein sequence | MMESTEKLTD TNAILAYLYE TFPLCFIAEG ETKPLKIGLF QDLAERLADD SKVSKTQLRV
ALRRYTSSWR YLKCVKAGAQ RVNLDGEPCG ELEQEHIDHA QAMLKESQDK AKAKRAALAP
KPAAKKAPKK VAVPQRAKTE RPAKPAPKAA APVVNYVQAQ LTDLTKKQRV NVKLGMTPVA
GVITDINKED IHVQLDSGLT IKVRAEHILL
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