Gene Shew185_2432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2432 
Symbol 
ID5370857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2898337 
End bp2899356 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content43% 
IMG OID640830645 
Productdihydroorotate dehydrogenase 2 
Protein accessionYP_001366632 
Protein GI153000951 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0167] Dihydroorotate dehydrogenase 
TIGRFAM ID[TIGR01036] dihydroorotate dehydrogenase, subfamily 2 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.160194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTATA AAATCGCACA GAAAGTCATG TTTCAGATGG ATCCTGAGCG AGCTCATCAT 
CTTGCTATAG GCAGTCTAAA AATGACCGCC AATAGCCCGT TAACGTGTCT ATACGGACAA
ACGATTGCAC CGGCTCCCGT GAGCGTTATG GGACTGACTT TTCCTAACCC AGTGGGACTC
GCTGCCGGTA TGGACAAGGA CGGCGAATCG ATTGATGCCT TTCATGCGAT GGGATTTGGT
CATGTTGAAG TGGGCACTGT GACCCCAAGA CCACAACCCG GTAATGATTT ACCCCGTCTA
TTTAGATTAA AGCCTGCCAA AGGCATTATT AATCGCATGG GGTTTAATAA TAAAGGTGTC
GATAATCTGG TCAAAAATTT GATCGCTAAA AAGACCAACA TTATGGTTGG CGTCAATATT
GGTAAAAATA AAGACACCCC AGTAGAGCAA GGTAAAGACG ATTATTTGAT CTGCATGGAT
AAAGTTTATC TCCATGCGGC TTATATTGCG GTGAATATTT CATCACCCAA TACCCCAGGA
TTGCGATCGC TACAATATGG CGATCTATTA GATGAATTAT TGAGTGCAAT TAAAACTAAG
CAACTTGAGC TGGCCGAAAA GCATAAAAAA TACGTGCCCA TCGCGCTTAA AATTGCTCCA
GATTTAACCA TCGAAGAAAT TGAAAATATC GCGCAAGCTT TGATTAAAAA CAAATTTGAT
GGCGCAATTG CGACTAATAC TACCTTAACG CGTGATGGTG TTAGCGGTCT TGCCAACGCC
AATGAAAGCG GCGGCTTAAG CGGTAAACCG TTGACAGAGC TGTCTACCAA AGTGATCAAG
CAGTTAGCGA TATGCTTGAA AGGGCAGATC CCGATCATCG GTGTGGGCGG CATCAATAGT
GCCGAAGATG CCTTAGCCAA ATTTGATGCG GGCGCCACTA TGGTGCAGAT TTATTCGGGT
TTTATTTATC AAGGTCCGAA GTTAATTAAA GAAATTGTAA ATGCATACCG CTTGAAATAA
 
Protein sequence
MFYKIAQKVM FQMDPERAHH LAIGSLKMTA NSPLTCLYGQ TIAPAPVSVM GLTFPNPVGL 
AAGMDKDGES IDAFHAMGFG HVEVGTVTPR PQPGNDLPRL FRLKPAKGII NRMGFNNKGV
DNLVKNLIAK KTNIMVGVNI GKNKDTPVEQ GKDDYLICMD KVYLHAAYIA VNISSPNTPG
LRSLQYGDLL DELLSAIKTK QLELAEKHKK YVPIALKIAP DLTIEEIENI AQALIKNKFD
GAIATNTTLT RDGVSGLANA NESGGLSGKP LTELSTKVIK QLAICLKGQI PIIGVGGINS
AEDALAKFDA GATMVQIYSG FIYQGPKLIK EIVNAYRLK