Gene Shew185_2425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2425 
Symbol 
ID5369689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2889101 
End bp2889742 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content49% 
IMG OID640830638 
Productbifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 
Protein accessionYP_001366625 
Protein GI153000944 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase
[COG0140] Phosphoribosyl-ATP pyrophosphohydrolase 
TIGRFAM ID[TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACGC AAACAAACAC TAAAGCGGAT TTTAGCGAGC TGGATTGGGA CAAACAGGAT 
GGACTTATTC CTGCCGTGAT CCAAAATCAC TTATCGGGCA AGGTATTAAT GCTCGGTTAT
ATGGATAAGG CCGCGCTGGA AAAAACCTTG AGCACAGGTG ATGTCACCTT TTTCAGCCGC
TCAAAACAGC GTTTATGGAC TAAGGGTGAA ACCTCGGGCA ATACGCTAAA GTTGGTGGCT
ATCGATAAGG ACTGCGATAA CGACAGCCTG TTAGTGCAAG TGATCCCCAA CGGCCCAACC
TGCCACAAAG GCACCGAAAG TTGCTGGTTA GATGACAATG CGCACCCATT TTTGAACAAC
CTAGCCAGCT TAATCACCTC GCGTAAAGGG CAAAGTGCCG ATTCCAGCTA CACGGCGTCT
TTGTTTGCGC GCGGCACTAA ACGTATCGCC CAAAAGGTCG GGGAAGAAGG TCTTGAAACC
GCCCTTGCCG CTGCGACCCA CGATAAAGAA GAGCTGGTTA ACGAAGCCTC AGATCTTATC
TATCACTTGC TGGTATTGCT TGAAGATCAA GACTTAAGCC TCAGTGACAT CACAGCAAAC
TTGCTGGCAA GACATGAAAA GGCGCTGCAG AGCAAAGCAT AA
 
Protein sequence
MSTQTNTKAD FSELDWDKQD GLIPAVIQNH LSGKVLMLGY MDKAALEKTL STGDVTFFSR 
SKQRLWTKGE TSGNTLKLVA IDKDCDNDSL LVQVIPNGPT CHKGTESCWL DDNAHPFLNN
LASLITSRKG QSADSSYTAS LFARGTKRIA QKVGEEGLET ALAAATHDKE ELVNEASDLI
YHLLVLLEDQ DLSLSDITAN LLARHEKALQ SKA