| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2412 |
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| Symbol | |
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| ID | 5372811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2873867 |
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| End bp | 2875855 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640830625 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001366612 |
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| Protein GI | 153000931 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.115111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCGCT TAATCCGCCG TACTCGCAAA ACAAGTCATA CATCCGGTGC AGCTCTGTCT
CCTAAACTGA GCCTGCTATC GCGCGCCATT GGCTTAAGCC TGTTGTTACC CGCTGCATGG
GCAACTGCCG CAGCTCCCCA AGATGCCACG CCAGAAATGG AACGTATGGT GATCACAGCT
ACGCAAACTC AGCATTCAGA ACTGTCGGCG CCCGCTTCTG TGTCAGTAAT TAATCGCAGT
GAACTCGAAG CGCTAGTGAT CGACGATCTG GCCAGTGCAG TGCGTTATTT ACAGGGCGTG
AATATCAGTG AAGGCACGCC CTATGGTCGC AATGAAATTA GCCTGCGCGG ACTGGATTCG
GACTACACGC TGATCTTAAT CAACGGCCGC CGAGTCAACT CCCGCGAAGC ACTAACCTCC
GGTTATGGCA ACGATTTTGA CTTATCATCC ATTCCCATGT CTGCGATTGA GCGAATCGAA
GTCGTGCGCG GGCCTATGTC ATCCCTCTAT GGCTCCGAAG CCTTAGGCGG TGTGGTTAAC
GTGATTTTGC GCCAACCTAC TGACGACTGG CAGACCAGTG TCGGCGTGCA ATACGATGCG
CCCACCAGCG GCAAAGGCGG CGACAGCACT AAGTACAACT TCTACACCAG CGGCGCGCTG
ATCAAAGATA AATTACTGGC AAACTTAATC ATCGATAGCA ATAAACGCGA TGCCTGGCGC
TCAGATTTAA AACCCACAAT CGATGCGTTA GAAGACAGAG ATGAAATCAG CGCCCTCGCT
AACCTGCAAT GGTTGATTGA TAGCCAACAA GATCTGCAAT TTGACTTAAG TTACGCCAAC
GACGAACGCG AGTCGGATTG GAATAACTAC GGCACTATCC TCACCAATAA CCAGCAAGCC
GAGCGGATAA GCTCAGGTTT AACCCACAAT GGCCACTGGA ATTGGGGCGA TACTCGCCTG
CGCTATTACT ATGAAAATGT TGAGGTGACT GACGACTCCG CGCTGATCGC CGAGATTGGG
CATATCACCC AAACTAACCA CAATCTCGAC GGCCAAACCA CAGTACTACT TGGGGATCAC
ATGTTAACCA GCGGCGCGGA ATACCGTTGG ACCCAGCTTG AAAACAGCCG CAACATATTG
GGCGATGGCA CCTTAGACGA CAGCCAATCG GCCTTGTATC TGCAAGATGA ATTTAGCTTA
GGCGAACTCA ATATCACCTT AGGCGGGCGC GTCGATCACC ACGATGTGTA CGGCACCGAA
TTTAGCCCAC GCGTGTATTT GGTGTATAAC TTAAGCTCTG AATGGGTGAT CAAAGGTGGC
GGTGGCAAGG CATTTAAAGC GCCGAATATG TCGCAATCCC AAGCCGATTA TATTATCCCC
GCTTGTCGCG GCGCCTGCAC CGTTGCGGGG AATCCCGATC TACAGCCCGA AACCTCAGTG
AACTACGAGA TATCGACCCA ATATCAAACC ACGGATTTTG GTGGCTCAAT CACCTACTTC
CACAACGATG TGGAAAATAA AATCATCACA GAAACCTGGG ATAGAACGCC CGGCGCAGTG
TTGACTTATC AAAACGTGAA CGAAGCCAAG ATCACCGGCT GGGAACTACA GGCTTGGTAC
GATGTAACCG ACACGATCAG CTTTAGCGGT AATTACAGTA AAACCGATGC CGAAGATAAG
CAAAATGGCG CGCCTTTTAC CCTAACGCCG GATGACAGCT ACAACCTGAA ACTGCAATGG
CAGGCATTGG ATGGCTTATC CACCTTTATC GCCTACCACT ATACTGGCGA TCAGTATCTA
CGCACCAATG TAAAATCAGA AGGTTATGGT TCACTCGACC TAGGGGCAAA TTACCAAATT
AATCCTATGT TCAGAGTCAA ACTCGGCGTC ACTAACCTAA CGGATGCTGA GCGCGACCAA
GTGGCTACCG ATCTTGATTA CATTCAAAAG AGCCGCAGTA TTTATGCGGG CGTGACGGCA
AGTTTCTAA
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| Protein sequence | MSRLIRRTRK TSHTSGAALS PKLSLLSRAI GLSLLLPAAW ATAAAPQDAT PEMERMVITA
TQTQHSELSA PASVSVINRS ELEALVIDDL ASAVRYLQGV NISEGTPYGR NEISLRGLDS
DYTLILINGR RVNSREALTS GYGNDFDLSS IPMSAIERIE VVRGPMSSLY GSEALGGVVN
VILRQPTDDW QTSVGVQYDA PTSGKGGDST KYNFYTSGAL IKDKLLANLI IDSNKRDAWR
SDLKPTIDAL EDRDEISALA NLQWLIDSQQ DLQFDLSYAN DERESDWNNY GTILTNNQQA
ERISSGLTHN GHWNWGDTRL RYYYENVEVT DDSALIAEIG HITQTNHNLD GQTTVLLGDH
MLTSGAEYRW TQLENSRNIL GDGTLDDSQS ALYLQDEFSL GELNITLGGR VDHHDVYGTE
FSPRVYLVYN LSSEWVIKGG GGKAFKAPNM SQSQADYIIP ACRGACTVAG NPDLQPETSV
NYEISTQYQT TDFGGSITYF HNDVENKIIT ETWDRTPGAV LTYQNVNEAK ITGWELQAWY
DVTDTISFSG NYSKTDAEDK QNGAPFTLTP DDSYNLKLQW QALDGLSTFI AYHYTGDQYL
RTNVKSEGYG SLDLGANYQI NPMFRVKLGV TNLTDAERDQ VATDLDYIQK SRSIYAGVTA
SF
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