Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2406 |
Symbol | |
ID | 5370040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 2866272 |
End bp | 2867648 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640830619 |
Product | L-serine dehydratase 1 |
Protein accession | YP_001366606 |
Protein GI | 153000925 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAGCG TATTTGACAT GTTCAAGATC GGCATAGGTC CATCGAGTTC ACATACTGTC GGCCCAATGA AAGCGGGCAA AATTTTTATG CAAAACCTGA CTGACTCAGG ACTCGTGACC CAGATTGATG AATTAAGAGC CGAGCTCTTT GGCTCCCTCG GCCAAACAGG CAAAGGCCAC GGCACGGGCA AAGCAGTGAT TTTAGGCTTA ATGGGTGAAG ATCCAGAAAC CGTAGACACT GACAGTATCG ACGGCATTTT AGAGCACGTC TCCAAGGACG AAACCTTAAC CCTGCACTGC GGCAAAGTGG TTAAATTTAC CCGCGAGCAA GGCATTACTT ACCACAGACG CAAAACCTTG CCAGCACACG CCAACGCCAT GACCTTATAC GCTTATTGTA AAGATGAGTG TATTTTCGAG CGCACTTATT ATTCTGTCGG CGGCGGCTTT ATCTTAGATG AAGACGAAAT CAGCCAACGT AATGCATCAC CTGCATCACC AATTGAAGCA GCACCTTTTG ATTTTGGCAG CGCAGCACAG TTATTAGAAT TGTGTGGCGA GCAAGGTCTG AGCATTTCTT CTTTGATGAT GGCGAACGAA CTGAGTTTAG CCACAGAAGA TGAAGTCAAA GCCAAGCTGT GGAACATTTG GCAGACGATG AAAACCTGTA TCGAACGCGG TTATCAAAAA GAAGGCATTT TACCTGGTGG CTTAAAACTG CGTCGCCGCG CCCCTGCCCT GTACCGTCGT TTGAAAGCCG AAGGCCGTAA CAACGTCGAT CCATTAACCG CAATGGATTG GGTCGATTTA TTCGCCCTGT CAGTAAACGA GCAAAATGCG GCCGGCGCTC GCGTCGTGAC GGCGCCAACT AACGGCGCGG CGGGAATTAT CCCTGCAGTA TTATGCTATT ACGATACCTT CGTACAAGAA GTGGATATCG ATGTCTGCGC CCGTTACCTG TTAACCGCCG CCGCGATTGG TATTTTGTAC AAGAAGAATG CCTCAATTTC TGGCGCCGAA GTGGGTTGCC AAGGTGAAGT CGGCGTAGCC TGTTCTATGG CCGCTGGCGC ACTGACTGAA ATCATGGGCG GCACGATTGA GCACGTTGAA AACGCAGCTG AAATCGGCAT GGAACATAAC TTAGGCTTAA CCTGCGATCC TGTGGGCGGC CTAGTGCAAG TGCCTTGTAT CGAACGTAAT GCCATGGGCG CGATCAAAGC GATCAACGCC TCTCGTATGG CCCTACGCGG TGACGGTCAC CATAAGGTTT CACTGGATAA AGTGATCAAA ACCATGATGG ATACCGGCAG AGATATGCGC AGCAAATACA AAGAAACCGC CAAAGGCGGC CTAGCAGTCA ACATTGTTGA GTGCTAA
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Protein sequence | MISVFDMFKI GIGPSSSHTV GPMKAGKIFM QNLTDSGLVT QIDELRAELF GSLGQTGKGH GTGKAVILGL MGEDPETVDT DSIDGILEHV SKDETLTLHC GKVVKFTREQ GITYHRRKTL PAHANAMTLY AYCKDECIFE RTYYSVGGGF ILDEDEISQR NASPASPIEA APFDFGSAAQ LLELCGEQGL SISSLMMANE LSLATEDEVK AKLWNIWQTM KTCIERGYQK EGILPGGLKL RRRAPALYRR LKAEGRNNVD PLTAMDWVDL FALSVNEQNA AGARVVTAPT NGAAGIIPAV LCYYDTFVQE VDIDVCARYL LTAAAIGILY KKNASISGAE VGCQGEVGVA CSMAAGALTE IMGGTIEHVE NAAEIGMEHN LGLTCDPVGG LVQVPCIERN AMGAIKAINA SRMALRGDGH HKVSLDKVIK TMMDTGRDMR SKYKETAKGG LAVNIVEC
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