| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2393 |
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| Symbol | |
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| ID | 5373576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2849029 |
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| End bp | 2850261 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640830607 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_001366594 |
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| Protein GI | 153000913 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000160813 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCAG GATTTCCTTT CTATATTGGT TACCGTTATT GGCGGGCCAG AAAAGCGAAC
GCGTTCGCGT CGTTCATTAC TCTATTTGCC GTTTCGGGCA TTTTTTTAGG CGTTGCCGCG
CTCATTGTCG TGAGCTCTGT GATGAATGGT CTCGAAGGCC AACTCAAGCA ACGTATCTTA
GGCGCAGTAC CGCAATTAAC TCTTTATAGT GAAGCGCCCT TAGTCGATTG GACTGAGCAG
GCGAGTGCGC TAAAAGCCTT ACCTGGCGTA TTAGGCGTGA CGCCGAGCGT GTCGACGCAG
GCCATGGTGC AATCGGCGGC GAGTATTCGT GCTGTGCAGG TTTATGGCGT GTTCCCCGAG
TTAGCGGAAA AGTTATCTTC GGTTGCCCAG CACACTTACT CAGGTGCATT TGAGCAGCTG
ACGAGCGGCG ACTACAAGGT GATTTTAGGC TCTGAGCTGG CAAGGCAACT TAAAGTCGCC
CCAGGTGATA CAGTGCGATT ACTGAGTGGC GATGGCGTGG TGTATTCGCC CTTAGGCCCA
GTGCCGAGCC AACGTAAGTT TTTGGTCTCG GGCATTTTTG AAATGGGCTC TCAGGTCGAT
GCGGGCGTGG CGTATATCCA TTATCAAGAT GCGAAACGGC TTATGCGCCA ACCCAGTGAG
GCTATCGATC AGCTCAGACT CTATTTAGCC GATCCCTTTA GCGCACCTGC TTTAGCGCCT
AAAGTGCAGG ATATATTAGC TAAACAAGGT GTTAAGGCGA CAACCAGCGA TTGGCGTGAT
ACCTATGGCC ACTTGTTCGG TGCGGTCAAA ATGGAAAAGA ACATGATGTC GCTGATGTTG
AGTCTGATTG TGGCCGTGGC CGCATTCAAT ATCGTCTCGG CGCTGGTCAT GATGGTGGTC
GATAAAACCA CAGATGTGGC GGTGCTCAAA ACTCAAGGCG TGACCACACC CGCCGTGATG
GGCATTTTTG TGGTGCAAGG GTCGCTCAAT GCAGTGCTCG GTTTAGTGCT GGGGCTGGCG
GTTGGGATAC TCATCACCTT GAATCTGAAT GGCATTATGA CCACCTTAGG GATTTCTATT
CTAGGCGTAG GGCAAAGTTT GCCGGTGAAA CTGGAATTGA TGCAGTTGTC TGTGATCGTG
ATTGGTACGC TGCTGGTGAC CCTGCTGGCG ACCTTATATC CCGCACTGCG CGCCGCCAAT
GTGCAACCCG CGACTGCGCT CAGATATGAG TAA
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| Protein sequence | MNPGFPFYIG YRYWRARKAN AFASFITLFA VSGIFLGVAA LIVVSSVMNG LEGQLKQRIL
GAVPQLTLYS EAPLVDWTEQ ASALKALPGV LGVTPSVSTQ AMVQSAASIR AVQVYGVFPE
LAEKLSSVAQ HTYSGAFEQL TSGDYKVILG SELARQLKVA PGDTVRLLSG DGVVYSPLGP
VPSQRKFLVS GIFEMGSQVD AGVAYIHYQD AKRLMRQPSE AIDQLRLYLA DPFSAPALAP
KVQDILAKQG VKATTSDWRD TYGHLFGAVK MEKNMMSLML SLIVAVAAFN IVSALVMMVV
DKTTDVAVLK TQGVTTPAVM GIFVVQGSLN AVLGLVLGLA VGILITLNLN GIMTTLGISI
LGVGQSLPVK LELMQLSVIV IGTLLVTLLA TLYPALRAAN VQPATALRYE
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