Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2391 |
Symbol | |
ID | 5372372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2846959 |
End bp | 2848209 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640830605 |
Product | LolC/E family lipoprotein releasing system, transmembrane protein |
Protein accession | YP_001366592 |
Protein GI | 153000911 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000572807 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGAC CGTTAGCCTT ATCCATTGGT TGGCGTTTTT ATCGCGCCCG CCAATCCAAC AGCTTTATTA GCTTTATTTC CTTCGCATCG ACTGCGGGCA TCGCCTTAGG CGTGGCGGTA TTGATCATCG TTCTGTCGGC GATGAACGGT TTTGAGCGCG AGTTAGAACA TAGATTGCTT GGCGTCGTGC CGCAGGCGGA CATAGTTGGC GTGAGTGAGC CTATCGCGAA CTGGCAGAGT GTTGCCGAGG GAGCGCTGTT AATTGAAGGT ATTCGCGGCG CGGCGCCTTT TATCCGCATG CAAGGTTTAG TGCAAAAGCC CGGCGGTTTT CAAGGTTTAG CCGTGGTGGG GATCGATCCA AAAGAAGAAA TCAAGGTCTC GACACTGGCG CAATTTATGA GCGATGCCAG CTGGCAGAGT CTAGGCCAAG ATGAGAATAA CATCGTCCTT GGGCAGAGTT TGTTGACCAA GTTGGGGCTT GAGGTTGGCG ATACGCTGGC CTTATATGTG CAGGATCTGG ATCCAGAAGC GGCGGGCAGT TTACGCGCGG CGAAGAGCCA TCGTTTTGTG GTGTCTGGCG CCTATAATCT TGGCGGCGAG CTTGAGCTGA CTACGGCTTA TATTCCTATG CAGTACGCGG CGCAGATTTT GAACATGAAG AGCGGCGTGA CTGGCGTGCG TATTAGCGTC GATAAAGTGT TTGATGCGCC CGTCAAAGTG CGCGAGCTTG GTTATGCGCA AAAGCAGTCG GTGTATATCA GTGACTGGAC CCGTACCCAA GGGCATTTAT ATCAAGACAT TCAGTTGGTT CGCACAGTCA TGTACTTAGT GCTTGTGCTG GTGATTGGTG TCGCCTGCTT TAATATCGTT TCCACCTTAG TGATGGCAGT GCGGGATAAA GCCTCTGAGA TTGCGATTTT GATGACTATG GGCCTGAGCC GCCTTGCTGT GATGGGGATT TTCATGGTGC AGGGCGCCTT GAATGGTCTG CTTGGCTGTG GTCTTGGCGG GATTATCGGC GTGAGTGTGG CACTGAATTT AAGTGCGATT GCCAGTACGA TGGAGCAGTT ACTCGGTATT CAACTGCTGT CAGCCGATGT GTACTTTGTC GATTTTTTAC CGTCTGAGTT ACATGGCTCA GATGCGGTGT TGGTGATTGT GATGGCGTTT GTGATGAGCT TAGTCGCCAC ACTCTATCCT GCTTGGAAAG CCAGTCAGAT TGCGCCAGCG CAAGCCTTAG CGGGGAGATA A
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Protein sequence | MKGPLALSIG WRFYRARQSN SFISFISFAS TAGIALGVAV LIIVLSAMNG FERELEHRLL GVVPQADIVG VSEPIANWQS VAEGALLIEG IRGAAPFIRM QGLVQKPGGF QGLAVVGIDP KEEIKVSTLA QFMSDASWQS LGQDENNIVL GQSLLTKLGL EVGDTLALYV QDLDPEAAGS LRAAKSHRFV VSGAYNLGGE LELTTAYIPM QYAAQILNMK SGVTGVRISV DKVFDAPVKV RELGYAQKQS VYISDWTRTQ GHLYQDIQLV RTVMYLVLVL VIGVACFNIV STLVMAVRDK ASEIAILMTM GLSRLAVMGI FMVQGALNGL LGCGLGGIIG VSVALNLSAI ASTMEQLLGI QLLSADVYFV DFLPSELHGS DAVLVIVMAF VMSLVATLYP AWKASQIAPA QALAGR
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