Gene Shew185_2383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2383 
SymbolhscB 
ID5371809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2840652 
End bp2841176 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content48% 
IMG OID640830597 
Productco-chaperone HscB 
Protein accessionYP_001366584 
Protein GI153000903 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1076] DnaJ-domain-containing proteins 1 
TIGRFAM ID[TIGR00714] Fe-S protein assembly co-chaperone HscB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000460884 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTATT TCGAGCTGTT TAAATTTTCC CCTGCCTTCG ATATTGATAC CGCCTTACTT 
GCAGAACGCT ATCGCGAACT GCAACGGGCG GTTCATCCCG ATAAATTTGC CAACGATACT
GAGCAGCAAA AACTGCTGTC GGTGCAGCGC ACGGCGCAAG TCAATGATGG TTTTCAAACC
TTAAAAGATC CCATTCGCCG CGCCGAGCAT ATGCTGTCGC TGCGTGGCAT TGAACTAAGC
CATGAAACCA CGACAGTGAA AGATACTGGC TTCTTGATGC AGCAAATGGA ATGGCGCGAA
GCGTTGGAAG ATATACGCGA TAGTGCCGAT CCTCAAGCGA GTATTGACGA GTTATATCAA
TCGTTTGCGC AGTACCGCGC GCAACTCACT CAGCAATTGA CTCAACTGTT AACCAGTGAG
CAGGCTGAAG ATGCATTGTT AGCGGCGGAT CAAGTTCGCA AACTCAAATT TATGGCAAAA
TTACACGACG AGTTGACCAG AGTCGAAGAC GCTCTGTTAG ATTGA
 
Protein sequence
MNYFELFKFS PAFDIDTALL AERYRELQRA VHPDKFANDT EQQKLLSVQR TAQVNDGFQT 
LKDPIRRAEH MLSLRGIELS HETTTVKDTG FLMQQMEWRE ALEDIRDSAD PQASIDELYQ
SFAQYRAQLT QQLTQLLTSE QAEDALLAAD QVRKLKFMAK LHDELTRVED ALLD