Gene Shew185_2370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2370 
Symbol 
ID5371864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp2826361 
End bp2827023 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content45% 
IMG OID640830584 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001366571 
Protein GI153000890 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0414256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATGA ATGTATACAT ACAATTTAAG GTGAATATGA ATACTGCATT ACTCTACGAT 
CCACAATTAT GGACTTTGAT GGCTTCTGCC GCGTTGTTTT GTGCAACCAT GACCATGACG 
CCCGGACCGA ACAATATCCT CTTAGCGAGC TCTGGTGCAC ATTTTGGTGT GCTGCGTACC 
GTGCCGCACA TTGCAGGGAT CCGCTTGGGT TCGACTTCTT TACACCTTGC GGTGTTATTT 
GGGCTTGGCA CCTTGTTTGA AGCATTACCG ATATTGCACC AAGTATTGAA ATATTTCGCT 
TTGGCGTATT TGCTGTATCT CGCGTACAAA TTAGTGACGT CGCCAGTGCA GAGCACGCAT 
TTAGATGACG GACGAAAACC TATGACCCTG ATTGAGGCCG CCTTGTTTCA ATGGATTAAT 
CCTAAGTCGT GGATGTCGAC CATCACTCTG TGCAGCGCTT TCACTCTCGG CGGTGATGGC 
TTTTGGCTCA GTGCCTTTCT TGGGGTATTA ACCTTTAACT TAGTAGGATT TCCGGCTTCA 
TTTACTTGGG TGTTTGTTGG TGCGGCGATC AGTAAGAAAC TCAATACCGA TAGACGTAAG 
CGTCATTTTA ATTGGTTTAT GGGCAGTTTA CTTTTAGTGT CACTGCCGAT GATATTGCGC 
TAA
 
Protein sequence
MSMNVYIQFK VNMNTALLYD PQLWTLMASA ALFCATMTMT PGPNNILLAS SGAHFGVLRT 
VPHIAGIRLG STSLHLAVLF GLGTLFEALP ILHQVLKYFA LAYLLYLAYK LVTSPVQSTH 
LDDGRKPMTL IEAALFQWIN PKSWMSTITL CSAFTLGGDG FWLSAFLGVL TFNLVGFPAS 
FTWVFVGAAI SKKLNTDRRK RHFNWFMGSL LLVSLPMILR