| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2359 |
|---|
| Symbol | |
|---|
| ID | 5371500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 2815926 |
|---|
| End bp | 2816363 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640830573 |
|---|
| Product | transposase IS200-family protein |
|---|
| Protein accession | YP_001366560 |
|---|
| Protein GI | 153000879 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1943] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00152656 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGATT ATAGAAGTTC ATCACATGTT TATTGGCGTT GCAAATATCA TATTGTTTGG
ACTCCGAAGT ACCGTTTTAA AATTTTAAAA GGAAACCTTG GTAAGGAGTT ATACAGGTCA
ATTTATATCC TTTGCAATAT GAAGGGTTGT GAGGTTTTAG AATTAAACGT TCAGATAGAC
CACGTTCACT TGGTAGTCAT AATCCCGCCG AAGCTGTCAG TATCAACGCT GATGGGAGTA
TTGAAAGGAA GAAGTGCGAT AAGGCTATTC AATAAATTCC CTCATGTACG TAAAAAGCTA
TGGGGCAATA GCTTTTGGGC CAGAGGTTAT TTTGTAGATA CAGTAGGGGT TAATGAAGAA
ATCATTAGAC GATATGTGCG CCATCAAGAT AAACAAGATC AGGAACATGA GGCTCAATTG
TCGTTGCAGA TGATGTAG
|
|---|
| Protein sequence | MGDYRSSSHV YWRCKYHIVW TPKYRFKILK GNLGKELYRS IYILCNMKGC EVLELNVQID
HVHLVVIIPP KLSVSTLMGV LKGRSAIRLF NKFPHVRKKL WGNSFWARGY FVDTVGVNEE
IIRRYVRHQD KQDQEHEAQL SLQMM
|
|---|
| |