| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2337 |
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| Symbol | |
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| ID | 5372283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2789540 |
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| End bp | 2792116 |
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| Gene Length | 2577 bp |
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| Protein Length | 858 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640830551 |
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| Product | glucan 1,4-alpha-glucosidase |
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| Protein accession | YP_001366538 |
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| Protein GI | 153000857 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | [TIGR01535] glucan 1,4-alpha-glucosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATCGA GTCCTACGCC GCAGCAGGAT CTGCACACTA GCCAAACCCG TCACGCACAA
ACGTTAACAA GGCGCAGCCG CCTAGCGCTT GCCGTCGCCG CAAGTCTATT AGGGACAATA
GGATTCACTG CTTGTTCACC CACATCGAAT TCAGCAACAC CAAGCATGAG TGGCAATGCC
GCATCAAATG TGCAGCTGGT TGCGCCCGGC GCACCGGGTA AAGCACCGAC TTGGGCATTT
TCGGGTAAAA CCGGTATTGG AACGTCGTAC GAGCCTTACA CCCAAGGTCA ATACCAAGAT
GCCAAGCAGA ATCCTATTAG CCGCGTTTGG TTCTCCCTCG CCCAAGGTAT TTTAACCGAA
ACCATGTATG GTCTTATTCA CAATGCGCAG CTCAAAGAAC TGCAATTTGT GATCACGGGA
AATGGCTTTG TCGATACAGA AAAAGATAAC ACCATCAGCA GCATAGAATA TTTAGATACC
GATGCTAATG GTCGCCCACA ATCCCTTGCC TATAAAATTA TCAATAAAGA TATTGAAGGT
AAGTATCAGA TTGAAAAGCA TATCTTTACC GATCCTGACC GCGACACCCT AATGATGCGC
GTCACCTTTA CCGCCTTTGA AGACGGCATT ACGCCGCATT TGTATGTCAA TCCGCATATC
GATAACGCGG GCGCCAATGA TATCGGCCGC ATCGACACTA ATACAGACAA TCATACCAAC
ACACATGCTG GCAATCAGGC GCTGGTGGCC TATACCGCCG CCAAAGACAG CAGCGTGATG
ACGGTCAAAT CCGAGCTGAA TTTTGTGCAG GCAACGACAG GCTTTGTCGG TGTCTCCGAT
GGTCTAGCCG ATTTGGCCGA TAACGGCAAA CTCGATACAC CCTATCAAAC GACCAGTACG
CAAGATAAAT CGACCGTTGG CAATATAGCT TTTACTGCGA GTTACCCTAC GCTCATCAAA
GCCAAACCCG TCACTTTTAA TCTCGTCATC GGTTTTGGTA AAGATGGAGC ACAGAGTTTA
GCCAATGCCG ATGCCACTTT GGCCGCAGGT TATGATGCTG TGCTGAGCGC CTATAAAGGC
GATGCCACCC ATGTCGGCTG GCACGATTAC TTAAGCTCGC TGCCCGCCAT CGCAAACATG
GCCAACAACA CCACAGATAG CGGTAAGCTG CTGTATACCA GTGCTATGGT CTTGAAAGCG
CAGGAAGATA AAACCTATGC GGGAGCACTT ATCGCCTCGT TATCCAATCC TTGGGGCGAT
ACGGTTTCAG CAGCCGTGCC GAGTACTGGC TATAAAGCGG TATGGCCGCG TGACTTTTAC
CAATGTGCCA TGGCATTCCT CGCCATGGGT GACACCCAAA CGCCCAAAGT GGCCTTCGAA
TACCTGAAAA AAGTGCAAGT GACCGAAATG ACGCCCGGCT TTACGGGTAC GCCGGGTTGG
TTCCTGCAAA AGACCCATGT GGATGGCCAA ATTGAGTGGG TTGGTGTGCA GCTCGATCAA
ACCGCCATGC CTATCATGCT CGGCTGGAAA CTCTGGCAAG CGGGTGTGCT CACCCCTGAT
GAGATCAGTC ACTGGTATCA AGAGATGCTC AAAGGTGCTG CAGACTTCTT GATCAGTGGC
GGTGAGGTCA ATCTGGATTG GAATCACACT CAAATCGCCC CGCCAAAAAC CCAGCAAGAG
CGTTGGGAAG AACAAGCGGG TTACTCACCC TCGACCACGG CCGCAGTGAT CGCAGGTCTT
GTTGCCGCGA GTGAAATAGC CAAAGAAGCC AAGGATCCCG ACTCCAGCAG CCGTTATCTT
GCAGCCGCCA AAGACTTAAG TAATAGTTTA GAAAAACACT TAGTCACCAC CCAAGGACTA
CTAAAAAACA GCGCAGGCGT CAGCGCGCCT TACTATTTAC GTTTAAGCCC AAATGGCGAG
CCAAACACCA GCGATAGACT GGCGGCAAAT AACGGTAAGC AAGGTTTAGA TCAACGTCAG
ATCCTCGATG GCGGATTTTT AGAACTAGTA CGTTATGGCG TGCGCGGTGC AACTGATAAG
CTCATCAATC AAAGCCTTCA ATTGATTGAT AACACTGAAC TTGACTCTAA TTTGCGCCTT
AAATATGAGT TTACTGCCAA AGATGGCAGC AAAATCCCAG GCTTTAGACG TTATGGCAAC
GATGGCTACG GTGAGGATAC GGTTTCTGGC AAGAACTATG CGGAATCGGG CAGCAACAGC
GCCGATCAAC GTGGCCGCGT CTGGCCCTTC TTCACCGGTG AGCGCGGTCA TTTTGAATTA
GCACTCGCCC AAGAAAAAGG CGAGCTAACA GGCAATAACT CGCAGCAAAC CAAGCAGCAG
TTGATCAACA CCTATGTGCA AGGCATGGAA ACGTTTGCGA ATGCGGGCAT GATGTTACCC
GAGCAAGCGT GGGACGGTGT CGGCGATGCC ACCCGCTACC ATTACCAACT CGGACAAGGC
ACTAACTCAG CCACGCCGCT AGCCTGGACC CATGCCGAAT ACATTAAACT GGTGCGCTCA
ATGACCGACG GCCAAGTCTG GGATAACTAC CCTATCGTCC CAGCGGCATT GAAATAA
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| Protein sequence | MESSPTPQQD LHTSQTRHAQ TLTRRSRLAL AVAASLLGTI GFTACSPTSN SATPSMSGNA
ASNVQLVAPG APGKAPTWAF SGKTGIGTSY EPYTQGQYQD AKQNPISRVW FSLAQGILTE
TMYGLIHNAQ LKELQFVITG NGFVDTEKDN TISSIEYLDT DANGRPQSLA YKIINKDIEG
KYQIEKHIFT DPDRDTLMMR VTFTAFEDGI TPHLYVNPHI DNAGANDIGR IDTNTDNHTN
THAGNQALVA YTAAKDSSVM TVKSELNFVQ ATTGFVGVSD GLADLADNGK LDTPYQTTST
QDKSTVGNIA FTASYPTLIK AKPVTFNLVI GFGKDGAQSL ANADATLAAG YDAVLSAYKG
DATHVGWHDY LSSLPAIANM ANNTTDSGKL LYTSAMVLKA QEDKTYAGAL IASLSNPWGD
TVSAAVPSTG YKAVWPRDFY QCAMAFLAMG DTQTPKVAFE YLKKVQVTEM TPGFTGTPGW
FLQKTHVDGQ IEWVGVQLDQ TAMPIMLGWK LWQAGVLTPD EISHWYQEML KGAADFLISG
GEVNLDWNHT QIAPPKTQQE RWEEQAGYSP STTAAVIAGL VAASEIAKEA KDPDSSSRYL
AAAKDLSNSL EKHLVTTQGL LKNSAGVSAP YYLRLSPNGE PNTSDRLAAN NGKQGLDQRQ
ILDGGFLELV RYGVRGATDK LINQSLQLID NTELDSNLRL KYEFTAKDGS KIPGFRRYGN
DGYGEDTVSG KNYAESGSNS ADQRGRVWPF FTGERGHFEL ALAQEKGELT GNNSQQTKQQ
LINTYVQGME TFANAGMMLP EQAWDGVGDA TRYHYQLGQG TNSATPLAWT HAEYIKLVRS
MTDGQVWDNY PIVPAALK
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