Gene Shew185_2333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2333 
Symbol 
ID5373840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2785458 
End bp2786327 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content45% 
IMG OID640830547 
Productalpha/beta hydrolase fold 
Protein accessionYP_001366534 
Protein GI153000853 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCAAA TTTGGACTGA ATTACAACAG GCTCAGGTTT TTAAAACCTT TTCAGATATT 
GGCGAACCCG CTCATTTCTA TCATGCCAAT GGTTTTCCAT TAGGCGTTTA TGCTCCCTTA
TTGGCCAAGT TGCAGCAAGC GTTCAGCCTT AATGCACTCG AGTTAAGGCC GACATGGCCT
GATGCCGGTA TGCCGCCTAA GCGTCGAGAT TGGCAGCTTT ATGCCGATGA TTTGATCTTG
CATATTGAGC GGCATTGCAG TGCGCCGATT GTCGGAATTG GCCATTCCAT GGGAGCAACC
TGTACCATTC TTGCCGCCAA TAAAAGACCT GATTTGTTTA AAGCACTGAT ACTAATTGAA
CCTGCAATGG TATCGCTCCC TATCGCTTGG TTTGCTAAGT TAATGCCTAA ATCGTTAATG
AATCTGACCG CGCCCGCAAA AAACACCTTA AAGAAGCGCG ATGTGTGGGA AACCCGGGAG
CAATATATCG AATATTGCAA AATGAGTAAG CTATACAAAC GCTTTGATGA TGAGGCTTTT
ATCGCCTTAG CCCAATTTGG GATTCATCAA AACAATGAAG GCCAATTCTC TCTGACGTTT
CCTAAACGAT GGGAAGCGCA TAACTACACT CAACCGCCGA ATGTATTATC GATATTGAAA
CAGATAAAGC TTCCCTGCGT GGCCATCCGG GGGAAACCGT CAGTGTTCTT TTCTGAAGCG
ACCTGGCAGC GCTGGCAACA GCTCACGCCG GATACAGTAT TTTTAGAAGA TAAGCGATAT
GGGCATTTGC TGCCATTAGA AGAACCATCT GCCTGCTTTA GCCTTATAAA TCAAGGGCTC
AGTGAACTTA ATAGTAAACG GGTGAAGTGA
 
Protein sequence
MDQIWTELQQ AQVFKTFSDI GEPAHFYHAN GFPLGVYAPL LAKLQQAFSL NALELRPTWP 
DAGMPPKRRD WQLYADDLIL HIERHCSAPI VGIGHSMGAT CTILAANKRP DLFKALILIE
PAMVSLPIAW FAKLMPKSLM NLTAPAKNTL KKRDVWETRE QYIEYCKMSK LYKRFDDEAF
IALAQFGIHQ NNEGQFSLTF PKRWEAHNYT QPPNVLSILK QIKLPCVAIR GKPSVFFSEA
TWQRWQQLTP DTVFLEDKRY GHLLPLEEPS ACFSLINQGL SELNSKRVK