| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2326 |
|---|
| Symbol | |
|---|
| ID | 5370090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 2777552 |
|---|
| End bp | 2778115 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640830540 |
|---|
| Product | DTW domain-containing protein |
|---|
| Protein accession | YP_001366527 |
|---|
| Protein GI | 153000846 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3148] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.644426 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATTA TTTTATTGAC CCACGAACGC GAGTTAACCC GCAAAACGAA TACTGGCCAA
CTCGCGTTAG CCGCATTCCC TGAAGAGGTG AAAAGCATCG TCTGGTCGAG AACGGCACCT
GATAACGATT TAGTGGCTAT GTTGGCATCG CAGCAGGCTA AACTGTTGTT TCCTGCAAGT
GATACTGAGC ACACTGGGCC CATTGATCAT AATGCCTTAG ATACGGTTTT AGCTGAGTCA
GTGCTCTCGA ACGCACAAAT GTTGTTAGCG CCTGCGCAAT CCACACTCAT AGCAGAACAG
CGAATGCCGA GCCAAGTGGT GATTTTAGAT GCGACCTGGC AGGAGGCACG TAAGATGCTG
CGCCAGAGCC CCTATCTGAA AACGGCTGCA CGAGTCAGTT TGCCGCCACT TATGCCTGAA
TCCGCCTTTA TATTGCGGCG TAATCAGCAA GAAGGGGGCT TGTGCACCGC AGAATGCATT
ATTGCGCTTT GGCGCCAGTG TGGCAGAGCA GAACAAGCGA CGCTATTAGC GTCGCTATTT
ACTGAATTGA ATAGCCGTAT TTGA
|
|---|
| Protein sequence | MQIILLTHER ELTRKTNTGQ LALAAFPEEV KSIVWSRTAP DNDLVAMLAS QQAKLLFPAS
DTEHTGPIDH NALDTVLAES VLSNAQMLLA PAQSTLIAEQ RMPSQVVILD ATWQEARKML
RQSPYLKTAA RVSLPPLMPE SAFILRRNQQ EGGLCTAECI IALWRQCGRA EQATLLASLF
TELNSRI
|
|---|
| |