| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2322 |
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| Symbol | |
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| ID | 5370106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2770383 |
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| End bp | 2772281 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640830536 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_001366523 |
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| Protein GI | 153000842 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
[COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase
[TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.756854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACCG AGCGTCCCGC GTTTGTTTGG ACCATAGCTG GTTCAGACAG TGGCGGTGGT
GCCGGTATTC AGGCGGACTT AGCGACAATT CAAGATTTGG GCTGTCACGG TTGCAGTGTG
GTCACCACAG TGACGGCGCA AAGTTCTGTG GCGGTCACTT TAGTCGAGCC CGTATCAGCG
GCGATGTTAA TGGCTCAGCT GACGACTTTA CTTTCCGACT TGCCACCCAA AGCAATTAAA
ATCGGCTTAC TGGCAGATCA AACTCAAGTG GCATTGCTGG CAGATTGGAT CGCGAGTTTT
AAAATCCACT ATCCATCTGT GCCTGTGATT GTCGATCCTG TGATGGTCGC CAGTTGTGGC
GATGCATTAG CAGTAGATAA CTGTCAGGAT ATAAAAAGTG CGGCCAAATC AGCCTTAGAT
TTTAGGCCTT TCAAAGGTTT AATCGAACTT ATCACGCCCA ATGTGCTTGA ACTTGGGCGA
TTAACTCACA GTGATGTTTC AACGAAAGCG CAATTCGCTG CCGCGGCACT GGCTTTATCC
CAGAGTCTTG ATTGCAGTGT GCTCGCCAAA GGGGGCGATG TAAGCTTTGG CAGCACTGAC
ATTCTTGAAA ATACTCATGC TAAAACTCAC GATAATACTT ATGCTCAAAC TCAGGCTAAC
GCTCACAATA GCAACGGCTG GGATCTTGAG CTTGCCGAGG ATTATCTGGT TTGCCATCAA
GTACGCGCGA GCTCTAAACT GCATCAAAAT GGGCGTTTCT GGTTAGCCAG CCAGCGGGTT
AATACCCGTC ATAACCATGG TAGCGGCTGT ACTTTGTCAT CGGCCATTGC CGCCGTGTTA
GCGCAGGGTT TTGTATTACA AGATGCGGTG GTGGTTGCCA AAGCCTATGT GAGTCAAGGC
TTAAGCGCGG CGATTGGCTT AGGACAAGGT CCAGGGCCGT TGGCCCGTAC GGGTTGGCCT
AATAACTTGT CCCGCTATGC CAAGATAAAT CTGTGTGATG GCAATTTTAT TCGTCATCAC
CTCAATCGAC ATCTTGATGT TAGAAGTGAT TTAGTTGCAA CAGTTTTATC CGCAACAGAT
CAGGCAACCG CTCAGGTAAG AATAGCCTCG ACGCCACCTC AAAATATTTT ATCCCACGGT
TTTAAAGTGC TCGATGCCGA GCTTGGTGTT TATCCCGTGG TGAGTGACTT AACCATGCTG
GAAAGTTTAT TAGCGGCAGG CGTTAAAACT GTGCAGTTAC GGATAAAAAC CGACATCAGC
GAGTTAACTA CTACCACCGC GCCAGCCGAA TCTGATTTAG GCAAGTCTGC GCTAGGTAGA
TGTGAGTCAG GCGAACCTGA GTTAATTGGC TCCGAATTAG AAGCACAAAT TCAAACAGCC
ATTGCCTTAG GCAAGCATTT TAATGCACAG CTTTTTATTA ATGATCACTG GAAGTTAGCG
ATAAAATACC ATGCCTTCGG GGTACATTTA GGCCAAGAAG ATCTCGCCGT TACTGACTTA
GCGGCCATTC AAGCCGCGGG GCTCGCGCTA GGAATATCGA GCCACAGTTA TTTCGAGTTG
CTATTGGCGC ACCAATACTC GCCATCCTAC ATAGCGCTTG GGCATATATT CCCAACCACG
ACGAAGCAAA TGCCTTCGGC GCCCCAAGGG CTCGCAAAAC TTAAACACTA TGTGGCGTTA
CTCCAAGGCC ATTATCCCTT GGTCGCCATT GGCGGTATTG ACTTAACAAA TCTGGCAAAG
GTGAAAGCAA CAGGGGTGGG CAATATTGCT GTGGTGCGCG CAATAACGAA AGCTAAGGAG
CCAGTCGCAG CGTTTGCAGA GCTGAGCCAA GCTTGGGAGC AATGTAGCTT GTGTGAAGAA
CTGGCTGTAA AGCAAGAGTT GGATGCAAAG CATGAGTAA
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| Protein sequence | MSTERPAFVW TIAGSDSGGG AGIQADLATI QDLGCHGCSV VTTVTAQSSV AVTLVEPVSA
AMLMAQLTTL LSDLPPKAIK IGLLADQTQV ALLADWIASF KIHYPSVPVI VDPVMVASCG
DALAVDNCQD IKSAAKSALD FRPFKGLIEL ITPNVLELGR LTHSDVSTKA QFAAAALALS
QSLDCSVLAK GGDVSFGSTD ILENTHAKTH DNTYAQTQAN AHNSNGWDLE LAEDYLVCHQ
VRASSKLHQN GRFWLASQRV NTRHNHGSGC TLSSAIAAVL AQGFVLQDAV VVAKAYVSQG
LSAAIGLGQG PGPLARTGWP NNLSRYAKIN LCDGNFIRHH LNRHLDVRSD LVATVLSATD
QATAQVRIAS TPPQNILSHG FKVLDAELGV YPVVSDLTML ESLLAAGVKT VQLRIKTDIS
ELTTTTAPAE SDLGKSALGR CESGEPELIG SELEAQIQTA IALGKHFNAQ LFINDHWKLA
IKYHAFGVHL GQEDLAVTDL AAIQAAGLAL GISSHSYFEL LLAHQYSPSY IALGHIFPTT
TKQMPSAPQG LAKLKHYVAL LQGHYPLVAI GGIDLTNLAK VKATGVGNIA VVRAITKAKE
PVAAFAELSQ AWEQCSLCEE LAVKQELDAK HE
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