Gene Shew185_2318 details

Gene Information

• Locus tag: Shew185_2318
• Symbol: thiH
• ID: 5370385
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: -
• Start bp: 2767381
• End bp: 2768496
• Gene Length: 1116 bp
• Protein Length: 371 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640830532
• Product: thiamine biosynthesis protein ThiH
• Protein accession: YP_001366519
• Protein GI: 153000838
• COG category: [H] Coenzyme transport and metabolism; [R] General function prediction only
• COG ID: [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes
• TIGRFAM ID: [TIGR02351] thiazole biosynthesis protein ThiH

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTTG TAGCGGAATT TACCAAGATC CCACGGGATA AACTGTTACT CGATTTGTAT 
TCTTGCACTG CCCAAGATGT TGAGCGGGCG CTGGTGAGTC CAGCAGGGGA TTTACGTAGC 
TTATTGGCCT TGTTATCACC TGCGGCTGAA CCTTATATCG AAACCATGGC GCAGCACTCT 
GCGGCGCTTA CGCGGCAGCG ATTTGGCGCG AATCTGGGCA TGTATTTACC GCTATACGTC 
TCGAATCTGT GCGCTAATGA GTGTGATTAC TGTGGCTTTA GCATGAGTAA CAAACTCAAA 
CGCAAGACCT TGAATGAGCT GGAGTTGATG GCCGAAATGG CCATTATCAA AGATAGGGGC 
TTCGATTCTG TTTTACTGGT GTCGGGTGAG CATGAAACTA AGGTCGGCAT CGATTATTTC 
AAGCAAATGT TGCCGCTGGT AAAGCAGCAA TTTAGCCATT TGGCGATGGA GGTCCAGCCC 
ATGAGTGAGG ACCATTATCG CCAGTTAGTC ACGCTAGGTT TAGATGCTGT GATGATTTAT 
CAGGAGACCT ATCAGCCCGA AACTTATGCT AGTCACCATT CCAGGGGGAA AAAAATGGAT 
TTTGCCTATC GCTTAGCAAC ACCTGACAGA GTTGCGGCGG CGGGCGTCGA TAAAATTGGT 
CTTGGGGTAT TACTCGGGCT GGATGATTGG CGTTTAGATG CGTTAATGAT GGGATATCAT 
CTCGACTATT TAGAGCGACG CTATTGGCGC ACCCGCTTTA GTATTTCGCT ACCAAGGTTA 
CGACCTTGTA CTGGCGGGAT CACCCCAAAA GTCATGCTAT CGGATCTAGG TTTAGTGCAA 
ATGATTTGTG CATTTAGACT TTTTAATCAA CAGCTTGACA TCAGCATGTC GACAAGGGAA 
AGCCCTGAGC TGAGGGATAA TCTTTTGCCA CTTGGGATCA CTCAAATCAG TGCGGGCAGT 
TCGACACAAC CGGGCGGCTA TCAAGCGCCT GACAGTCAAC TCGATCAATT CGAGATAAGC 
GATGATCGCA GTGTCGAGCT AGTTATCGAA CAGATGCAAC GGCAGGGTTT TAATCCCGTA 
TTTAAGGATT GGGAAGCTAA TTGGATCACA GGATAA 

 

Protein sequence

MSFVAEFTKI PRDKLLLDLY SCTAQDVERA LVSPAGDLRS LLALLSPAAE PYIETMAQHS 
AALTRQRFGA NLGMYLPLYV SNLCANECDY CGFSMSNKLK RKTLNELELM AEMAIIKDRG 
FDSVLLVSGE HETKVGIDYF KQMLPLVKQQ FSHLAMEVQP MSEDHYRQLV TLGLDAVMIY 
QETYQPETYA SHHSRGKKMD FAYRLATPDR VAAAGVDKIG LGVLLGLDDW RLDALMMGYH 
LDYLERRYWR TRFSISLPRL RPCTGGITPK VMLSDLGLVQ MICAFRLFNQ QLDISMSTRE 
SPELRDNLLP LGITQISAGS STQPGGYQAP DSQLDQFEIS DDRSVELVIE QMQRQGFNPV 
FKDWEANWIT G