Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2312 |
Symbol | |
ID | 5370467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 2758957 |
End bp | 2760462 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640830526 |
Product | gonadoliberin III-related protein |
Protein accession | YP_001366513 |
Protein GI | 153000832 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACTCAC GCAACCCTTT CTATATCTTG GTGGCAGTGC TCTTTATTGT CGGCATCGGT GCCAGCATTT ACCGCGGCGT CGAGCATAAC GTGCCCTTTT TGCCCGGTAA GCAAGTTCAA AGCTGGGCCG TGGAAGCCAA AGTCAGTTTT CAAGGTACGG GTGAGCCTGC AGAAGTGTCT TTCTCTTTAC CGCAAGATCC TGCCTACCAA GTGCTGGTCG AAAATGCCAG TTCACCGGGT TACGGTTTAA CCATCAATCA TAATGACAAC GATCGCCGCG CGGTTTGGTC GATACGCCAA GCCCTAGGCA CACAGGATTT ATATTACAAA GTGACACTGG TGCCGACAGG CAGTACGCAG ATACCAGCGA CTCAAACTCC CACAGCGCCC GAAGCCTATT TATGGCCCGT GACTGAACAA GCCGCCGCAG AGCAAGTGAT TGCAGATGTC TGGGCTCGCA GTGCGAGCAA CCTCTCCTTC GCCCAACAAT TGATGGCATC GATAACCGAG CCTAAACGCA GCCAGAATGT AGAGCTATTG CTCGCAAGCC AAACGCCGAC CCAACTGTTT TTACACATGC TACACACTAA GGGCATTCCT GCGCACAAGG TCAGCGGTTT GTATTTAGAA GATCAACGCC GTCGACAGCC CTTATCACCT TTTGTTGAAG TCTTTCACGA CGGTCAATGG GTATTATTCG ATTTAGTCAA AGGCAAACAA GGTCGCCCCC AAAACCTGCT ACTGTGGGAG CGTGCAGGCC ACTCAGTGCT TGATGTCATG GGCGGCGTTA ACTCGCAGGT GAACTTCGCT ATGCTGCAGG ACACCCGTTC CGCCCTTGCG ACGTCTATCG ACATGATGAT GAACAACAAT GCGCTCGATT TCTCCCTCTA CCAATTACCC CTTGAGGAGC AAAGCCTTTT TAAAGGGATC TTGCTGATCC CCATTGGCGT ACTGATGGTG GTATTTTTGC GGGTGATGAT TGGCATTAAA ACCTCAGGGA CTTTTATGCC AGTATTAATC GCACTGGCCT TTATTCAAAC CAGCTTACTC ACCGGATTAA TTGGTTTTTT GCTTATCGTT TCCTGCGGAC TCGTCATCCG TTCCTACCTG TCCCATTTAA ATCTACTGCT AATCTCACGG ATATCGGCAG TGATCATCGT GGTGATTGGG ATCATCGGCG TATTCACACT GCTTTCCTAC AAGTTTGGTT TGAGTGAAGG CTTAACCATT ACTTTCTTCC CGATGATTAT TCTAGCGTGG ACCATAGAAC GTATGTCGAT TCTGTGGGAA GAAGAAGGTC CGAGGGAGGT CATGCTCCAA GGTGGCGGCA GTTTGATGGT TGCCACCTTG GCCTACCTCG CCATGAGCGC AAGCTGGGTA CAGCATTGGG TGTTTAACTT CCTCGGGATT CACTTAGTGA TCTTGGCCTT AGTATTACTT ATGGGGCAAT ACACTGGTTA TCGCCTGCTC GAGCTCAAAC GTTTTAAATC ATTGGCGGGA ACATAA
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Protein sequence | MHSRNPFYIL VAVLFIVGIG ASIYRGVEHN VPFLPGKQVQ SWAVEAKVSF QGTGEPAEVS FSLPQDPAYQ VLVENASSPG YGLTINHNDN DRRAVWSIRQ ALGTQDLYYK VTLVPTGSTQ IPATQTPTAP EAYLWPVTEQ AAAEQVIADV WARSASNLSF AQQLMASITE PKRSQNVELL LASQTPTQLF LHMLHTKGIP AHKVSGLYLE DQRRRQPLSP FVEVFHDGQW VLFDLVKGKQ GRPQNLLLWE RAGHSVLDVM GGVNSQVNFA MLQDTRSALA TSIDMMMNNN ALDFSLYQLP LEEQSLFKGI LLIPIGVLMV VFLRVMIGIK TSGTFMPVLI ALAFIQTSLL TGLIGFLLIV SCGLVIRSYL SHLNLLLISR ISAVIIVVIG IIGVFTLLSY KFGLSEGLTI TFFPMIILAW TIERMSILWE EEGPREVMLQ GGGSLMVATL AYLAMSASWV QHWVFNFLGI HLVILALVLL MGQYTGYRLL ELKRFKSLAG T
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