| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2308 |
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| Symbol | |
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| ID | 5371636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2753167 |
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| End bp | 2755953 |
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| Gene Length | 2787 bp |
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| Protein Length | 928 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640830522 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001366509 |
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| Protein GI | 153000828 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00466975 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCTTGT GCAGCTGTTT TTTGAGTATA ACAGGGCAGG CAAGTCCATT GCCCGACGAG
CCATTAATTG TGGTGATGGG GGAGGATAGC TTTCCCTATC AATATGTCGA CAACGATGGC
GAGCCGACTG GACTACTGGT CGATTTATGG AAAGAGTGGG CGAAACAAAG CCATACCCAA
GTGGTTTTTG TGGCGCGACA CTGGCACGAG TCCCTTGATC AACTGCGGCA AGGTAAGGCG
CAAGTGCATA TCGGCATGGG GAAAACCCCA GAGCGTGAGC AAGAGTTCGA CTTTGCTGAG
CCCATCGCCG ATGTCGGCAC TTTTTTATAT CTGCATAAAT CCCTGCAGGG TAAAAAGTCC
ATTAAAGAAC TCATTCCCTT TCAAATTGGT GTGGTAGCTG CTTCATCTCA CGAGGCGGAA
TTGCACCGTA TCGAACCTCA ACTCGTGTTT AAACGTTACG AAAGTCGTGA GAAATTACTT
GCTGGGGTCG CAGCCGGCGA GATTATGGTG TTTGCGGGCT TAGAAGGTTA TTTGAAAGAT
CCCGCTTCAT CCCAAGAGAT TGCCGCGAAT TATCCCAATA CGGCGCGTAT CCAAATTAAG
GCGATGCAAT TTGTTCCTGC GGTCAAAAAG GGCAATCTCG ATTTAGTTGA TAGGATCAAT
AAAGGTTTCA CCGCGCTCGA TCCGCACTTT ATCCAACAAA CGGAGCGACG ATGGCTTGGC
TACCAACGTC AACAAGCTGG GATTGTTATT TCCATGCAAC TGGGCGCCGA GCCTTTTGTG
GACTTAGGGG TCGATGGTTT ACCCCATGGC TTGTATGTGG ACATGTGGCA GCTTTGGTCT
GAGAAGACCG GTATCGCCGT CGATTTTATT TCTGGCGATA TGAACTCCAG TGTGGATGAC
GTTCGCCGAG GTCTTGCCGA TGCGCACATT GGTTATCCAG AGAGTGATGA TGTCAAAACG
GGGCTTAATC GGGCTTGGCA CTTATATACG GTTAAGAGCC GCTTGTTTCT CTTTCAGCAG
CAGTTGACCG ATTTAGACAG CTTAAAAGGT AAACGTATTG GGGTGGTGCC GACGGCGCCT
TATCTGGTGG AGTTACGTAA AGCCTTACCC CAAATGGCAC TGCGCTATTA CGACAATATG
GATGCCATGG TCGCGGGCGC AAGATCAGGC GAGATTGCTG GCTTTGTGGC TTCGGGTGCA
TGGACATCCC ATTATTTACT GCTCAATAAA GGCTGGTCTG ACTTTAGCCA GTATCCCAAT
CTCGAATTTA GCACCAACAT TTATGTGCTG ACTCGCAGTG ATGATCCAGG TCTGACGCAG
CGGATCGCCA ATGGATTTAA CAATATTAGC AATCAAGAGT TTGCCGATAT TGAAAATAAA
TGGATGCTCA ATCCCAAAGA TCATGTTTTT ACCCAAACTG AACGGCATGT CAGCTTAAGC
CCTGCAGAAC AGGCCTATGT GGAAAGTGTA GGCGAGCTTA AAGTGGGCTA TTTAAAGCAA
TGGCCGCCGA TGGAGTTTAT GGATGAGCAG GGCGAGTTTG CGGGGATCAA CAGCGATATC
GTCAAATTAC TCAAGGAACA GCTCAAACTT AAGCTCACGC CCGTTGCCTT TGATGATTGG
CATTCGTTAA TCGAGGCGTT GCAAAAGGGC GAGGTAAGTT TAGCCGGCAG TGTCGCCCAA
ACGGCAGAGC GCCAGCAGCG TTTAGCGTTT AGTGAGGCTT ATTGGCCATC GCCGTGGGCA
TTAGTGTCGC AATTGGAGCA AGTCTCGGTA TTCAATATTG CGCAGCTCGC AGGACAAAGG
GTAGCTGTGG TCGAAGGCTA TCATTTAGTG GCGCAATTGA TGAGTCTTGA ACCTTCACTC
AAGTTAGTGA TAGTGCCAAA TACGCAGGCG GGATTGGCGG CGGTAACGAA TGGCAATGCG
GATGTGTTTA TCGATAAAGT GGTGACGTTG GCGTCTGAAC TTAAAACCAG CCACTATCCG
ACGCTGAAAA TGTCGCTGCT GAGTGATCTT GCCGATCAGC ATAGCCATAT TGGTGTTTAT
CCTCAGTTTG CGCCGCTGGT GCCACTGATT AACAAAGCCT TAGCCTTGAT TGATACTCAG
CATCAGCAGC AAATTTATGC GCGTTGGGTG TCATTTTCTG TCGCGACAGA GAGTGCTAAA
TATCTGCTAT GGCTGCGTTA TATCGTATTT GGCGTGATAA TCTTGTGCTC AGTGATGGTG
GCAGTGTTGT TAGTAAATCG CCGCTTAAAT CGTGAGATCA CCCAGCGATT AGTCGCTGAA
AAACGTTTGC TGCATGTGGC GAACCACGAT GCTTTGACTC AGTTACCTAA CCGCGCCTTG
CTCGATGACA GATTAGCCCA AGCTTTGCTG TCCCATCAGC GCGAGCAAGC GCATTTTGCC
TTGCTATTTA TCGATCTGGA TGGATTTAAA CAAATCAATG ATCAACATGG TCATCCGATT
GGCGATGAAT TACTGGTACA AGTTGCCCGA AAGTTAACCA AGGTTATCCG TGGCTCAGAT
ACCGTGGCGC GATTTGGTGG CGATGAATTT GTTATCCTGC TAAATCGTGT GCAAGATCTC
GATGCTGCAA CCCAAGTTGC TGATAATATT CTACAGGCAC TGTCGAGCCC TTTGCTTATT
CAAGGTGTCA GTGTCAGCAT AGCGGTTAGT ATGGGCGTGG TGATTTACCC CCGCGATGGT
GATACCGCGA TAGGCTTATT GAAAAAAGCC GATCAGTTAA TGTACCAAGC AAAAAGTTGC
GGCGGGCGTT GTTATCGCTC AGCTTGA
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| Protein sequence | MILCSCFLSI TGQASPLPDE PLIVVMGEDS FPYQYVDNDG EPTGLLVDLW KEWAKQSHTQ
VVFVARHWHE SLDQLRQGKA QVHIGMGKTP EREQEFDFAE PIADVGTFLY LHKSLQGKKS
IKELIPFQIG VVAASSHEAE LHRIEPQLVF KRYESREKLL AGVAAGEIMV FAGLEGYLKD
PASSQEIAAN YPNTARIQIK AMQFVPAVKK GNLDLVDRIN KGFTALDPHF IQQTERRWLG
YQRQQAGIVI SMQLGAEPFV DLGVDGLPHG LYVDMWQLWS EKTGIAVDFI SGDMNSSVDD
VRRGLADAHI GYPESDDVKT GLNRAWHLYT VKSRLFLFQQ QLTDLDSLKG KRIGVVPTAP
YLVELRKALP QMALRYYDNM DAMVAGARSG EIAGFVASGA WTSHYLLLNK GWSDFSQYPN
LEFSTNIYVL TRSDDPGLTQ RIANGFNNIS NQEFADIENK WMLNPKDHVF TQTERHVSLS
PAEQAYVESV GELKVGYLKQ WPPMEFMDEQ GEFAGINSDI VKLLKEQLKL KLTPVAFDDW
HSLIEALQKG EVSLAGSVAQ TAERQQRLAF SEAYWPSPWA LVSQLEQVSV FNIAQLAGQR
VAVVEGYHLV AQLMSLEPSL KLVIVPNTQA GLAAVTNGNA DVFIDKVVTL ASELKTSHYP
TLKMSLLSDL ADQHSHIGVY PQFAPLVPLI NKALALIDTQ HQQQIYARWV SFSVATESAK
YLLWLRYIVF GVIILCSVMV AVLLVNRRLN REITQRLVAE KRLLHVANHD ALTQLPNRAL
LDDRLAQALL SHQREQAHFA LLFIDLDGFK QINDQHGHPI GDELLVQVAR KLTKVIRGSD
TVARFGGDEF VILLNRVQDL DAATQVADNI LQALSSPLLI QGVSVSIAVS MGVVIYPRDG
DTAIGLLKKA DQLMYQAKSC GGRCYRSA
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