Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2302 |
Symbol | |
ID | 5371652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2744275 |
End bp | 2746836 |
Gene Length | 2562 bp |
Protein Length | 853 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640830516 |
Product | TonB-dependent receptor plug |
Protein accession | YP_001366503 |
Protein GI | 153000822 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.780014 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAAA GAACCAAAGT AGCGTCGGCT ATTAACTTAG CTATCGTTGC ATCTATCACT TCTGGTGCAT TTGTAACGTC AAGCGCATTT GCAGCGGAAG AAAAAGCCAA AGTTGAACGT ATTGAAGTCA CGGGTTCACG CATTCAGCGC CAAGATATGG AAACAGCTTC ACCTGTGACC GTTATTGATG CTGCTGCGAT TAAAGCGGAA GGTTTTACTT CTGTTGACCA AATGCTACAA GTACAAACAT CTATGGCGGG TGCAGCCGTG GGTTCAAGCA CTAACAATGG TGCTGATGGC GTCGCGCAAG TTGATTTACG TGGTATGGGT TCACAGCGCA CGCTTGTATT ACTGAATGGC CGTCGTATGG TGAACTCAGG TTCTGGTGCT GATAGTGCAG TGGATCTGAA CTCAATCCCT GTGGCTATGA TCGCACGTGT TGAAATTCTG AAAGATGGCG CCTCAGCGGT TTATGGTTCA GATGCGATTG CCGGTGTAGT GAACATTATC ACTAAGAAAG ACTTTGAAGG TTTCCAGCTC GATTTTAACG GCAGTGGCAC TGACAAAGGT GACGGTGAGA GTGGTGATGT AAGTGCATTA TATGGTTTCA ACACAGAGGG TGGTAACTAC ACCTTTGGTG CTGCTTATGC TGACCGTCGT GGTGTTATCC AAGGTGATCG AGATTGGTAT GACCCACTCG ATAATACGAG TTCAATTATT CCAACTGGTG CATTAAACCA GAAGGTTATT GATGCAAATG GTAATTGGGT TAACAGAGCC ACAGGTTATG ATTATTCGAA TGACGTTTAC TTCCAAACGC CAAGCGAACG CCGTAGCTTA TTTGCAAATA TGACACAAGA GTTAGGTAAT GATGTGGTAC TAACCGCGGA TGCTATCTAT ACCAATCGCC GTTCAAACCA ACAGCTTGCG GCACAGCCTG CGCAAATCAA ATTAAATGTT TGTGGCGACC CAAGAGTGAC AGATCCAACT GCTGGTTGCC TTAATCTTGA CCAAAGCATG GTTGATGCAG GGATTAAAGC TGACGCTCGC GGACAAGTGC AATATAACAG ACGTATGAAT GATGTTGGAC CTCGTGTTTA CAGCCAAGAT ACTGATACTT GGCGTTTATC TGGTGGATTA GCGGGTTCTT TGGATGTTCA TACTGGTATG AACTGGAATG TGGACTACAC ATTTGGTAAG AACGAGGCTA AAACTGGTGT TGATAACTCA ATTAACGCAA CATTAATGGC TGCTTCTATT TATGCAGACC CATATGCGTG GTTTGAAGGG TCTCCACTGA CGAATGAAAT GAAAGACGTT TCGTATGACG AGAAATCAAC TGGTGGCAAT GAACAACAAA CGTTGTCTGC TGGCTTAAAT GGTGAACTCT TCGATTTAAG TGCGGGTGCT GTGGGCTTTG CGATTGGCGC TGAATACCGT CGTGAAAGTG GTTTCTATAA TCCAGATCCA GTTGTTGTCG CTGGCGATAG TACTGCTGCT CAGCAAGACC CTACAAGCGG TAACTACAAC GTTATCTCTA TTTTCCAAGA AGTGAGCGTA CCATTTACAG AAAAATTAAC GGGTGAATTT GCACTGCGTT TAGATGATTA TTCAACATTT GGTAAAGCAA CTACGTGGAA AATTGGGTTG ACATATGTCG CATCCGACGA ACTTATGTTA CGTACTGTCG CTGCTACAGG TTTCCGTGCT CCAAGTGTTG CTGAATTATA TGGTGGTAAT TCAGGTTCTT TTGATTATTT AACGAACCCT TGGTTACCTC TGAGTGAACA AACTGGACAG ATTTTAGTTA ATCGCACATC TGATGAAAAT TTAAAACCTG AAGAATCTGA GTCATATACC GCTGGTTTAG TTTACTCACC AAGCTATATT GATGGTATGT CTCTGACTTT AGACTACTGG CGTTTCAAAG TAACCAATGC TATTGCTCGT GCAGATGTTC AAGTTGGTTT AGATGACTGT TATAAAGGTG ATGCTGAAGC ATGTAGTACA TTCAATATTA CTGCCGATGG TGATTTGTTT AATTTAACAA GTGCATTAAC AAACGTTGGG TCACAGGATA CTAGCGGTGT TGATTTCAAC TTAGCTTATA GCTTTGCATT GTTTGGGTTA GACTGGAAAG TCAGTAATGA CACTACATAC CTCATTAATT ATGAGCAAGA TGGTGAAAAC TATACTGGCA CTATCGATGG GAACTTCGGT GCTTACTCTC GTGTTCGTAA CAACTTCAGC ATTTCTGCGG GTCAAGATGA TTGGAGTGTA ATGTACTTCA ACCGCTATAT CCGATCTATG AATGATAATT ACACTGACTA TGATGTGAAT GATGAACCAT TTGCTGCTGT TAGAGGTGTT GATTCTATTC TGTATCACAA TATTTCTGGT ACTTATCACG TAAATGACAG CACCACAGTT AGCTTAGGGG TGAAGAACTT TACTGACGAG AAGCCGCTAT ACGTTACTAA CGGTAGTGAT GCTGGTACAG TTCCAGAAGT GTACGACACC ATTGGCCGTA CTATATACGG TGGTGTAACG GTTAAGTTCT AA
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Protein sequence | MIKRTKVASA INLAIVASIT SGAFVTSSAF AAEEKAKVER IEVTGSRIQR QDMETASPVT VIDAAAIKAE GFTSVDQMLQ VQTSMAGAAV GSSTNNGADG VAQVDLRGMG SQRTLVLLNG RRMVNSGSGA DSAVDLNSIP VAMIARVEIL KDGASAVYGS DAIAGVVNII TKKDFEGFQL DFNGSGTDKG DGESGDVSAL YGFNTEGGNY TFGAAYADRR GVIQGDRDWY DPLDNTSSII PTGALNQKVI DANGNWVNRA TGYDYSNDVY FQTPSERRSL FANMTQELGN DVVLTADAIY TNRRSNQQLA AQPAQIKLNV CGDPRVTDPT AGCLNLDQSM VDAGIKADAR GQVQYNRRMN DVGPRVYSQD TDTWRLSGGL AGSLDVHTGM NWNVDYTFGK NEAKTGVDNS INATLMAASI YADPYAWFEG SPLTNEMKDV SYDEKSTGGN EQQTLSAGLN GELFDLSAGA VGFAIGAEYR RESGFYNPDP VVVAGDSTAA QQDPTSGNYN VISIFQEVSV PFTEKLTGEF ALRLDDYSTF GKATTWKIGL TYVASDELML RTVAATGFRA PSVAELYGGN SGSFDYLTNP WLPLSEQTGQ ILVNRTSDEN LKPEESESYT AGLVYSPSYI DGMSLTLDYW RFKVTNAIAR ADVQVGLDDC YKGDAEACST FNITADGDLF NLTSALTNVG SQDTSGVDFN LAYSFALFGL DWKVSNDTTY LINYEQDGEN YTGTIDGNFG AYSRVRNNFS ISAGQDDWSV MYFNRYIRSM NDNYTDYDVN DEPFAAVRGV DSILYHNISG TYHVNDSTTV SLGVKNFTDE KPLYVTNGSD AGTVPEVYDT IGRTIYGGVT VKF
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