Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2275 |
Symbol | |
ID | 5370533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2711887 |
End bp | 2712582 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640830489 |
Product | orotidine 5'-phosphate decarboxylase |
Protein accession | YP_001366476 |
Protein GI | 153000795 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000296065 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGACTA AACCTATCCT CGTAGCGCTT GATTACGATA ACAAAAACCA CGCTTTACAA CTGATAGAAA AACTCGATCC CAACATGTGC CGCCTTAAAG TCGGCAAAGA AATGTTTACC CTGTTTGGCC CGCAACTGGT GAAAGATATC CATGATCGTG GCTTTGATTT GTTCCTCGAT TTGAAATTTC ACGATATTCC CAATACTGTC GCCAAAGCCG TGGCCGCTGC CGCAGAGCTG GGTGTATGGA TGACGAATGT GCATGCCAGT GGTGGTTTAG CCATGATGGA AGCGGCCAAA AAGGCCTTGC TGCCATACGG CGACAAAGCG CCTATGCTGA TCGCTGTGAC GGTATTAACC TCCATGAGTG ATGATGATCT TAAATTACTC GGTATCAATG TGCCAGCGTT TGAGCATGTG CAACGTTTAG CTAAGCTGAC GCAGCAAGCA GGACTCGACG GCGTGGTGTG TTCAGCCCAA GAAGCAACAG CGTTAAAATC ACTGTTAGGT AAGGACTTCA AACTCGTGAC GCCGGGGATC CGCCCAGTTG GTAGTGATGC TGGCGATCAA CACCGGGTGA TGACGCCGCC TCAAGCGATT GCAGCGGGTT CAGATTACCT AGTGATTGGC CGTCCAATCA CTAAAGCCGC CGATCCGTTA GCGGCATTGC AAGCGATTCA CCAATCATTG GCATAG
|
Protein sequence | MTTKPILVAL DYDNKNHALQ LIEKLDPNMC RLKVGKEMFT LFGPQLVKDI HDRGFDLFLD LKFHDIPNTV AKAVAAAAEL GVWMTNVHAS GGLAMMEAAK KALLPYGDKA PMLIAVTVLT SMSDDDLKLL GINVPAFEHV QRLAKLTQQA GLDGVVCSAQ EATALKSLLG KDFKLVTPGI RPVGSDAGDQ HRVMTPPQAI AAGSDYLVIG RPITKAADPL AALQAIHQSL A
|
| |