| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2271 |
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| Symbol | |
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| ID | 5370246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2706682 |
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| End bp | 2708190 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640830485 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_001366472 |
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| Protein GI | 153000791 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000670154 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACGT TACTGAAAAC CACTCTGTAT GCCAGCCTAC TCTTAGCGGC GAGCCACACT
ATCGCCCGCG CTGATCAAAT CGACGCAGGA GCGATAGAGA CCCGAACCAC TTCGCTTAGC
CAAGCGGTCG GCAAAATCAG CCCTCGTCAT TCGCAAATTG CACTGCTGGC AATGGACATG
TCTAACAATC AAGTGATCTT TAGCCAACAG GCCGAGACGC TGTTTATTCC CGCCAGCACG
CAAAAATTAC TCACCGCTGT GAGCGCCATG ACTCAGCTTG GGCCTGATTT TCGTTATGTC
ACTGAATTAT GGACGGACGC ACCAATACGC AAGGGCCATA TCGCCGGCAG CGCTTATCTG
CGTTTTAGTG GCGATCCGAC GTTCACTCAA GCCGATCTCA AGGCCATTTT TGCCAGTCTC
GTGAAACAAG GCATTAATCG CATTGATGGA CATCTGTATT TGCTCGGCGA TAAAAAAGAG
CAAATGCAAG CCCCTGGCTG GGTTTGGGAT GACTTAGGCA TTTGTTTTGC CGCGCCTGTG
TCGAGTTACA TTATCAATCA AAACTGCGTC TATGGTCAGT TCAACCCCAG CACGGCCAAT
AAACCATCGC AGGTGAGCCT GCGCACGGGG AGTTATGGGG TAAAAGTCAG CAGCGATGCG
GTATTTGATC CCAAGGCGAG TCGTGAATTT TGCCAGCTCG ATTTGGTACG ACTAGGCCAA
AACAACTATC ATCTACGTGG TTGTTATCCG GGCGGTGAAG CGATTGGACT GGCGATTGCG
GTCAGCGATC CGTTCAAATT TGCCCAAGAT AACCTCACCT CGCTGCTCAA AGGCGAGATG
TCACTGGCGG GTAAAGTTAA GCTCGGCACT AGCTTGCCCA AAAAGGCGAA ACTGATTGCC
AGCCATAGCT CGGCGCCACT GCCTGAACTG CTCGATACTA TGTTGCTCAA GTCGGATAAT
TTGATTGCTG ATAGCCTGTT TAAACAGCTT GGCAAAAGTT ATTTCAACAC CCAAGGTAGC
TTTACCAATG GTGCGGCAGC CATGCTGCGG ATTTTAACGG AGTTAGGCGT CGATCTGAGT
AACGCTAACA TTGTCGATGG TTCAGGGCTG TCACGCTATA ACTTGCTCAA TGCACAGCAG
TTAGCGGCGG TATTGGCACT CATCCATAAG GACAGCCGCT TTAGCACGTT AATGACCAGT
CTGCCGCAAG CAGGAATAAG CGGCACCTTA AGGTATCGCA TGGGTTACAA CAAGCCGCCG
CTGAAAAAGC AAATTTTTGC TAAAACAGGC TCGATGCAAG GCGTGTCTAA CTTAGCGGGG
TTCATCCGTT TGCCTGAGCA CAGTGACACC CTGTTTGTGG TGCTTGAGAA TGGCATGAGT
CCCGAGCTTA AACATCAGCA TAAACCATCG TTTAATGCCG AGTTTCTCAA GCAATTGATT
TCAGTGCTGC AAGTGCCATC CCCCACCACA GCAGCGCTTA GTACCGCTGC TCACTCGGTC
CAAGATTAA
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| Protein sequence | METLLKTTLY ASLLLAASHT IARADQIDAG AIETRTTSLS QAVGKISPRH SQIALLAMDM
SNNQVIFSQQ AETLFIPAST QKLLTAVSAM TQLGPDFRYV TELWTDAPIR KGHIAGSAYL
RFSGDPTFTQ ADLKAIFASL VKQGINRIDG HLYLLGDKKE QMQAPGWVWD DLGICFAAPV
SSYIINQNCV YGQFNPSTAN KPSQVSLRTG SYGVKVSSDA VFDPKASREF CQLDLVRLGQ
NNYHLRGCYP GGEAIGLAIA VSDPFKFAQD NLTSLLKGEM SLAGKVKLGT SLPKKAKLIA
SHSSAPLPEL LDTMLLKSDN LIADSLFKQL GKSYFNTQGS FTNGAAAMLR ILTELGVDLS
NANIVDGSGL SRYNLLNAQQ LAAVLALIHK DSRFSTLMTS LPQAGISGTL RYRMGYNKPP
LKKQIFAKTG SMQGVSNLAG FIRLPEHSDT LFVVLENGMS PELKHQHKPS FNAEFLKQLI
SVLQVPSPTT AALSTAAHSV QD
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