| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2203 |
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| Symbol | |
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| ID | 5372715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2629686 |
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| End bp | 2630957 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640830416 |
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| Product | inner membrane transport protein YdhC |
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| Protein accession | YP_001366405 |
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| Protein GI | 153000724 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00024069 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACGT CTAGTAACAC CTTTGTAAAC ATAAAGTTCT TTATGTTTCT ATTCTATTTA
GCCATGTTGA GCATGCTCGG CTTTATTGCC ACTGACATGT ATTTGCCTGC TTTCAAAGCA
ATTGAAGGCT CACTTAACAG TACCCCATCA CAGGTGGCGA TGTCGCTGAC CTGTTTCCTG
GCGGGTCTTG CCTTAGGTCA GCTACTTTAT GGCCCCTTAG TCAATAAAAT CGGCAAACGT
TGGGCACTGA TTTTTGGCCT AGTGCTATTT GCCGTTGCCA GCGTGTTTAT TGCCAACAGT
GATTCTATCC TAATGCTCAA TACCGCGCGC TTCTTCCAAG CGATTGGCGC CTGTAGTGCA
GGGGTTATTT GGCAAGCGAT TGTGGTTGAG CAATATGATG CCGATAAAGC CCAAGGTATT
TTCAGTAACA TTATGCCACT GGTCGCATTA TCGCCTGCAT TAGCACCGAT CCTTGGCGCT
TACATTCTGA ACGAATTAGG CTGGCGTGCA ATCTTTATCT CTTTGTGTGT TATCGCTTTT
CTACTGATAT TGATGACATT GTACTTTGTG CCAGGCAAGC GTCAGCATAC ACACAGTGAA
CATGCTGCGG TATCTTATGG GCAAATTTTG AAAAACACCC GCTATTTAGG CAACGTCGTG
ATCTTCGGCG CCTGTTCCGG TGCTTTCTTT GCTTATCTAA CCGTATGGCC GATTGTGATG
GAAATGCACG GCTATCTGCC AACTGAAATC GGCCTTAGCT TTATCCCACA AACCATCATG
TTTATTGTCG GTGGTTATGC GAGTAAGTTA CTGATAAAAC GCATTGGCGG GCATCAAACA
CTGAATATCT TGTTGTCGAT TTTCGCAGCC TGCGTTATTT CGATCATCAT GTTCACGCTG
ATTTTCCCAG CAAGCACGAT TTTCCCACTG CTTATTTCGT TCTCTATTTT GGCCGCAGCT
AATGGCGCCA TTTACCCGAT AGTCGTGAAC AGCGCGTTAC AGCAATTTAG TCAGAATGCC
GCTAAGGCCG CAGGATTACA GAACTTCTTG CAGATCAGCA TTGCCTTTGG TGCATCTAGC
TTAGTCGCTA TGTGGGCGAG CCTAGGTGAA GTAGCGATCG GTTGGGGCAT CCTATGTTGC
GCTATCTTAG TTGTGGTCGG CTATGTGCTG AAGAGCCAAC AAGGGTGGGG CGATTTTGCC
AAACATTTCA CTAAGCCAGA TCCCGCACGT GTTGGCATAG TGGTCGATGT GAAGCAAAAT
CCAGCGGATT GA
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| Protein sequence | MKTSSNTFVN IKFFMFLFYL AMLSMLGFIA TDMYLPAFKA IEGSLNSTPS QVAMSLTCFL
AGLALGQLLY GPLVNKIGKR WALIFGLVLF AVASVFIANS DSILMLNTAR FFQAIGACSA
GVIWQAIVVE QYDADKAQGI FSNIMPLVAL SPALAPILGA YILNELGWRA IFISLCVIAF
LLILMTLYFV PGKRQHTHSE HAAVSYGQIL KNTRYLGNVV IFGACSGAFF AYLTVWPIVM
EMHGYLPTEI GLSFIPQTIM FIVGGYASKL LIKRIGGHQT LNILLSIFAA CVISIIMFTL
IFPASTIFPL LISFSILAAA NGAIYPIVVN SALQQFSQNA AKAAGLQNFL QISIAFGASS
LVAMWASLGE VAIGWGILCC AILVVVGYVL KSQQGWGDFA KHFTKPDPAR VGIVVDVKQN
PAD
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