| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2184 |
|---|
| Symbol | |
|---|
| ID | 5371412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 2603647 |
|---|
| End bp | 2604447 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640830399 |
|---|
| Product | phenazine biosynthesis PhzC/PhzF protein |
|---|
| Protein accession | YP_001366389 |
|---|
| Protein GI | 153000708 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0384] Predicted epimerase, PhzC/PhzF homolog |
|---|
| TIGRFAM ID | [TIGR00654] phenazine biosynthesis protein PhzF family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000556407 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTGCAAAG CGTTAAATTG CAGTCAAGGA TGGTGGATTA TCAAAATAGA GATTTATGAT
GTGTTTACCG GCGAATCGGC TTTTGGCAAT CCTTGTGGAG TGTTAGAGCT AAATAACTGG
CTGTCTGATA CTGAGTTGCA TCAAATTACT CATGATGTTG GACTGCCAGT GACTTCGTTC
ATTACTAACG TCGACGGACA ATTTCACATT CGCTGGTTTG CATTGGATGG TGAAATTAAC
CTTTGTGGTC ACGGTAGTTT GGGAGCTGGT GCAGCGCTCC TTTCTAAGTA CCCATTGGAA
AAAGTAGTTT TCAACAGTAA ACACGGTGAG GTAGTGATTT CTAAAAGAAA TGGCCTATAT
TCACTCGTAT TGCCGAGCTG GGAAGGTAAG TCTTGTGCTG TTCCAGCAGA AATATCTGAT
TTGGCGATTG ATGCCATTGA TGTTTTTTCT ACTCGAGATT TAGTCTTAGT TTTCCCCTCG
GTAGAGACGG TAATGAATTT CCAGCCAGAT TATAAGCGCT TGAGAGAAAT CAATGAATAT
CATGCTTTAA TTGTAACGGC TGCAAATAGT AATAATGGTT ATGTTCTAAG ATACTTTGCT
CCAAAAATTG GCATATCTGA AGATTTGGCA ACAGGCTCAG CACAATGCTC TCTTGCACCG
TATTGGTTTA AAAAATTTGG TTCAGACTCA TTGAATGTGC GTCAACTTTC AATGTCCGGT
GGTTATTTTG AAGTAGAGCG AGCAACTGAG AATTCAATAA CAGTATTTGC TCAAGCAAAG
CTGCGAGCAA TTGCAATTTA A
|
|---|
| Protein sequence | MCKALNCSQG WWIIKIEIYD VFTGESAFGN PCGVLELNNW LSDTELHQIT HDVGLPVTSF
ITNVDGQFHI RWFALDGEIN LCGHGSLGAG AALLSKYPLE KVVFNSKHGE VVISKRNGLY
SLVLPSWEGK SCAVPAEISD LAIDAIDVFS TRDLVLVFPS VETVMNFQPD YKRLREINEY
HALIVTAANS NNGYVLRYFA PKIGISEDLA TGSAQCSLAP YWFKKFGSDS LNVRQLSMSG
GYFEVERATE NSITVFAQAK LRAIAI
|
|---|
| |