| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2180 |
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| Symbol | |
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| ID | 5372256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2599332 |
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| End bp | 2600636 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640830395 |
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| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
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| Protein accession | YP_001366385 |
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| Protein GI | 153000704 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00037099 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACCG TAAATGAGCA ACCAGCCTTC AACCGCGATT TATTCCAACA ACTGCTTCAG
CCTGAGAATC TACACCGAGC TTGGCGACAG GTTAAAGCCA ATAATGGCGC GGCTGGTATC
GATGGCATGA CCATCGAAGC CTTCCCGCTT TGGATGCAAC AAGGCGGTTG GCAACGGTGT
AAATCTCTAC TGGAACGAGG TGAATATAAC CCTTCAGCAG TCAGACGCGT AGAGATCGAC
AAACCCGATG GCGGTAAACG CAAACTGGGT ATCCCTAACG TCATTGATCG TGTGATACAG
CAAGCTATTG CTCAAATTCT CACGCCGTTG TTTGACCCTT TCTTCTCGGC TAATAGCTTC
GGCTTTAGAC CGAATAGGAA TGCCAAACAA GCGGTCTTGC AAGTCAGAGA TATCATCAAA
CAGAAGCGCA AATTTGCCGT CGATGTTGAT CTGTCCAAGT TCTTTGATCG AGTAAATCAC
GACCTGTTGA TGACTCAATT GAGGATCAAG GTACAGGATA AGCGTCTGCT GGCGCTTATT
GGTAAATACC TGCGAGCTGG TGTGATGGTC AACGACCAAT TTGAAGCAAG CTTCGAAGGC
GTGCCTCAAG GCGGCCCACT CTCGCCATTA CTCTCTAACA TTATGTTGGA CAGTCTTGAT
AAAGAGCTGG AAAGCCGAGG GCACAAATTC GCCCGCTACG CGGACGACTT TATCATTTTG
GTAAAGTCTA TTCGAGCGGG AGAGCGGGTA CTCAAGAGTA TTACTCGCTA CCTTGCCACT
AAGCTAAAAT TGGTTGTTAA TGAACAGAAA AGCCAAGTGG TAGAGGTAGG TCAAAGCAAG
TTCCTCGGTT TTACCTTTAA CCGCGGGAAG ATCCAGTGGC ATGCTAAAAC ATTACACATT
TTTAAACAAA AGATGAAACG CCTGACGAAC CGAAATTGGG GCGTTAGCAT GGGATATCAA
TTGTTTAAAG TACGGCAATA CATGCAAGGC TGGATCAACT ACTTTGGCAT AGCCAACGCT
TATCAAGGGT GTGTCGATTT AGACCATTGG ATCCGTCGTC GAGTGCGTAT GTGCTACTGG
CGTCAGTGGC GAAAACCGCG GACTAAGGTA CAAAACTTAC TTAAACGTGG CGTCAGGATC
CAAGCTGCCG TTGCTTGTGG GATCACAAGT AAAGGCCCAT GGCGGAGCTC GAAAACACCA
GGAATACAGC AAGCGCTGAG TAATGAGTAT CTTAAGAAAG CAGGATTGTA TTCACTGAGA
GATGGATGGA TCGCGGTTCA CTATCCGAAC CAGAAAACAG GTTAG
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| Protein sequence | MATVNEQPAF NRDLFQQLLQ PENLHRAWRQ VKANNGAAGI DGMTIEAFPL WMQQGGWQRC
KSLLERGEYN PSAVRRVEID KPDGGKRKLG IPNVIDRVIQ QAIAQILTPL FDPFFSANSF
GFRPNRNAKQ AVLQVRDIIK QKRKFAVDVD LSKFFDRVNH DLLMTQLRIK VQDKRLLALI
GKYLRAGVMV NDQFEASFEG VPQGGPLSPL LSNIMLDSLD KELESRGHKF ARYADDFIIL
VKSIRAGERV LKSITRYLAT KLKLVVNEQK SQVVEVGQSK FLGFTFNRGK IQWHAKTLHI
FKQKMKRLTN RNWGVSMGYQ LFKVRQYMQG WINYFGIANA YQGCVDLDHW IRRRVRMCYW
RQWRKPRTKV QNLLKRGVRI QAAVACGITS KGPWRSSKTP GIQQALSNEY LKKAGLYSLR
DGWIAVHYPN QKTG
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