| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2157 |
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| Symbol | |
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| ID | 5372242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2574023 |
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| End bp | 2574961 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640830372 |
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| Product | protein of unknown function UPF0052 and CofD |
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| Protein accession | YP_001366362 |
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| Protein GI | 153000681 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01826] conserved hypothetical protein, cofD-related |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0381242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCATT TGATGTTAAA TCAATTTGAA CGTGTCGTCG CCATTGGCGG AGGCCATGGT
TTAGGCCGAG TATTATCCTC GCTCGATTTT TTAGGTAGCC GTTTAACGGG GATTGTCGCG
ACCACAGATA ATGGTGGCTC GACCGGTAGA CTCAGAGCAG AGCAGGACTG TATTGCTTGG
GGCGATTTAC GCAACTGCCT ATCCCATCTG GCCAATCGTC CTTCCGTCGG CTCACAACTG
TTCGAATACC GTTTCCAAGG TGAAACAGAG CTTAGCGGCC ATAATCTGGG TAATCTCATT
TTACTGGCGC TTGATCAACT GTGCGTTCGT CCATTAGAAG CGGTTAATCT TATCCGTAAC
TTACTCAAGA TTGAAACCCA GCTGATCCCT ATGTCTGAGC AACCCACGCA CTTAGTGGCT
CTGCAAGCTT GTGGTAGTAA AGTCTTTGGC GAGATCAATG TTGACAGCAT GGATGAAGCA
CCTATCGCGC TCTGCCTTGA GCCACAGGTC GATGCCACCT TTGAAGCCTG TGAGGCCGTT
CGGCACGCAG ATTTAGTTAT CCTAGGCCCT GGCAGCTTCT TAACCAGTAT CATGCCGCCG
TTGCTGTTAC CTAAGTTCGC GAAAAGCCTC GCCGCGACTA AAGCACAGGT GATCTTTATC
GATAACCTGG CCGAAGAAGC CTCACCCGCA GGTCGATTTA GCATTGAGCA ACGTATCGCT
TGGTGTCATC AAGTGATTGG CAAGCCCATC ATTCACAAAG TGTTACGTCA TGGCGAACAA
ACGCGTTTAG GGCCACTGAT CAACTATTTT CCGTTGAAGA ATCGCCATAA CCCGAACTTG
CATGATCAAG CGAACTTATT AGATGCATTA AGCGCCCTAT TGCGGATCAA ATCTGAGCTC
ACGCTGCAAT CGCACCAACC TCTTGCGCTT AGCTGCTAA
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| Protein sequence | MQHLMLNQFE RVVAIGGGHG LGRVLSSLDF LGSRLTGIVA TTDNGGSTGR LRAEQDCIAW
GDLRNCLSHL ANRPSVGSQL FEYRFQGETE LSGHNLGNLI LLALDQLCVR PLEAVNLIRN
LLKIETQLIP MSEQPTHLVA LQACGSKVFG EINVDSMDEA PIALCLEPQV DATFEACEAV
RHADLVILGP GSFLTSIMPP LLLPKFAKSL AATKAQVIFI DNLAEEASPA GRFSIEQRIA
WCHQVIGKPI IHKVLRHGEQ TRLGPLINYF PLKNRHNPNL HDQANLLDAL SALLRIKSEL
TLQSHQPLAL SC
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