Gene Shew185_2153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2153 
Symbol 
ID5372133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp2567865 
End bp2568875 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content44% 
IMG OID640830365 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_001366358 
Protein GI153000677 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.000000106853 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATCC GTGTAGCAAT AAATGGCTAT GGCCGTATCG GTAGAAACGT ATTACGCGCC 
TTGTACGAAA GCGAAAAAGC TTATCCAATC AAGATTGTCG CTATTAATGA TTTAGGCGAC 
GCTTCAATCA ACGCTCACCT GACAAAATAC GATTCTGTTC ACGGTCGTTT CAATGCCAAA 
GTTGACCATG ATGCCGAAGC GATTTATGTG AATGGCGATA AGATCCTCAC TTTCCAAGAA 
CGTGATCCTG CAAAACTGCC ATGGGCTGAA TTGCAAGTTG ACGTGGTTTT CGAATGTACT 
GGTATCTTCA CTTCTAAAGA AACTGTTCAA CCACATTTAA CTGCTGGCGC GAAGAAAGTG 
ATTATTTCTG CTCCAGGTAA AAACGTCGAT GCCACCGTTG TTTACGGTGT GAACAACAAC 
GTGCTGACGT CAGACATGAC AGTGATTTCA AATGCTTCTT GTACCACTAA CTGTTTAGCG 
CCTTTTGCTA AGCCGTTAAA TGACGAGATT GGTATCGAAT CAGGCCTGAT GACCACTATT 
CACGCTTATA CCAACGATCA ACGTTTATCT GACGTGTACC ACACAGATTT ACGTCGTGCC 
CGTGCTGCAG CACTGTCAAT GATCCCAACT AAAACTGGCG CAGCAGCAGC TGTAGGTTTG 
GTTGTACCTG AATTACAAGG TAAATTCGAC GGTTTAGCGG TTCGTGTACC TACAGTTAAC 
GTATCACTCG TGGATTTATC TTTCATCGCT GCCCGTGATA CGACTGTTGA AGAAGTGAAT 
GCCATTATCG AACGTGCTGC TAGCGTTGCG CCATTGAGCG AAGTATTAGC AGTAAACAAA 
GAGCCATTGG TGTCTATCGA CTTTAACCAC AATGCGTTCT CTTCAAACTT TGACGCCACT 
CAAACCCGTG TAAACGGTCG TTTAGTGAAA GTGATGTCTT GGTATGATAA CGAGTGGGGA 
TTCAGTAACC GTATGTTAGA TAACGCGGTT GCACTGATGA ACGCAAAGTA A
 
Protein sequence
MTIRVAINGY GRIGRNVLRA LYESEKAYPI KIVAINDLGD ASINAHLTKY DSVHGRFNAK 
VDHDAEAIYV NGDKILTFQE RDPAKLPWAE LQVDVVFECT GIFTSKETVQ PHLTAGAKKV 
IISAPGKNVD ATVVYGVNNN VLTSDMTVIS NASCTTNCLA PFAKPLNDEI GIESGLMTTI 
HAYTNDQRLS DVYHTDLRRA RAAALSMIPT KTGAAAAVGL VVPELQGKFD GLAVRVPTVN 
VSLVDLSFIA ARDTTVEEVN AIIERAASVA PLSEVLAVNK EPLVSIDFNH NAFSSNFDAT 
QTRVNGRLVK VMSWYDNEWG FSNRMLDNAV ALMNAK