| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2151 |
|---|
| Symbol | |
|---|
| ID | 5371116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 2564901 |
|---|
| End bp | 2566526 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640830363 |
|---|
| Product | dihydrolipoamide acetyltransferase |
|---|
| Protein accession | YP_001366356 |
|---|
| Protein GI | 153000675 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000843995 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAAG ATTTTATTTT GCCGGATATT GGCGAAGGTG TAGTGGAATG TGAATTGGTT
GAATGGTTGG TCAAAGAAGG CGACACAGTC GTTGAAGATC AGCCGATTGC CGATGTCATG
ACAGACAAAG CCCTAGTGCA AATCCCTGCG CCATTTGCGG GCGTGGTCAC TAAGCTGTAT
TACGCCAAGG GCGATATTGC GAAAGTGCAT GCGCCGCTCT ATGCCGTACA AATTGAAGGT
GCCGTTGAAA TCGCGAGTGA AGAGTCTATT GCGACTGAAC CTGCTGCGAC GACTTCAAAA
GTGACTGAGC CTGTGGCGGC AACAACTGCC AATACGTCAT CCAGTTCATC CGTCAGCATT
GAAGAATTCT TACTACCGGA TATCGGCGAA GGTATTGTTG AATGTGAACT CGTCGAATGG
CTAGTGAGCG AAGGTGATTG GGTTGAGGAA GATCAACCGA TTGCCGACGT GATGACAGAT
AAAGCGCTGG TGCAAATTCC TGCCATTAAA GCGGGTAAAA TTGCCAAACT GCATTATCGC
AAAGGTCAGC TAGCTAAAGT GCATGCGCCT TTATTTGCCA TTGAAGTTGA ACAGGCGGCT
TCTGCACCTG CGGCGACAAC AAACACTGAT ACTGTGGCCA ATGCGGCACC GGCAACGCAG
GCTGTAAGTG CAGAACCTGC TCGCCAAGGT AAATCCTTAG CCAGCCCTGC GGTTCGTCGC
ATGGCGCGTT CGTTAGATAT CGATTTGAGC CAAGTACCTG GCACAGGAAA GCACGGCCGT
GTGTACAAGG AAGACATCAC TCGTTTCCAA CAAGGCACGA GCAATGTTTC TGCTCCAAGT
ACGACTCAGG TAAAAGAGGC GCCAGCTCAA GCGACGCAAG CATCTCAAAC CCAAGTTCCA
ACATCGACAG TGACTCAACG CGCTGACACG GTTGAGCCGA TTCGCGGCGT AAAAGCTGTG
ATGGCACGCA TGATGGTTGA GTCGGTGTCG AGCATTCCGC ACTTTACCTA TTGCGAAGAG
TTTGATTTAA CAGACTTAGT TGCACTGCGT GAAAGCATGA AAGTGAAGTA TTCGTCCGAT
GAAGTGAAGC TGACTATGAT GCCTTTCTTC ATGAAGTCGA TGTCGCTCGC GTTAAGTCAG
TTCCCTGTGA TGAATAGCCA AGTGAATGCT GATTGCACTG AGCTGACTTA CAAGGCGCGC
CACAATATCG GCATGGCGGT GGATTCTAAA GTCGGTCTCT TGGTGCCAAA CATCAAAGAT
GTGCAGGACA AGAGCATTTT AGAAGTGGCG GCAGAAATCA CCCGCCTGAC CCAAGCAGCC
CGCAGTGGCC GCGTGGCGCC AGCGGATCTG AAAGACGGCA CGATTTCAAT CTCTAACATT
GGCGCCTTAG GTGGCACAGT GGCAACGCCT ATTATCAACA AACCTGAGGT GGCGATTGTG
GCCTTAGGTA AGTTGCAAAC CTTGCCGCGT TTTAACGCAA AAGGGGAAGT CGAAGCCCGC
CGAATCATGC AAGTGAGCTG GTCTGGCGAC CACAGAGTGA TCGATGGCGG TACCATTGCT
CGCTTCTGTA ATCTGTGGAA ACAATATCTG GAGCAGCCGC AAGAGATGTT ATTGGCCATG
CGTTAA
|
|---|
| Protein sequence | MIKDFILPDI GEGVVECELV EWLVKEGDTV VEDQPIADVM TDKALVQIPA PFAGVVTKLY
YAKGDIAKVH APLYAVQIEG AVEIASEESI ATEPAATTSK VTEPVAATTA NTSSSSSVSI
EEFLLPDIGE GIVECELVEW LVSEGDWVEE DQPIADVMTD KALVQIPAIK AGKIAKLHYR
KGQLAKVHAP LFAIEVEQAA SAPAATTNTD TVANAAPATQ AVSAEPARQG KSLASPAVRR
MARSLDIDLS QVPGTGKHGR VYKEDITRFQ QGTSNVSAPS TTQVKEAPAQ ATQASQTQVP
TSTVTQRADT VEPIRGVKAV MARMMVESVS SIPHFTYCEE FDLTDLVALR ESMKVKYSSD
EVKLTMMPFF MKSMSLALSQ FPVMNSQVNA DCTELTYKAR HNIGMAVDSK VGLLVPNIKD
VQDKSILEVA AEITRLTQAA RSGRVAPADL KDGTISISNI GALGGTVATP IINKPEVAIV
ALGKLQTLPR FNAKGEVEAR RIMQVSWSGD HRVIDGGTIA RFCNLWKQYL EQPQEMLLAM
R
|
|---|
| |