| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2150 |
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| Symbol | |
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| ID | 5371115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2563914 |
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| End bp | 2564891 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640830362 |
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| Product | transketolase central region |
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| Protein accession | YP_001366355 |
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| Protein GI | 153000674 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00434594 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTGAAA TGAATATGTT ACAGGCCGTC AATGAGGCCT TGTCGATCGC CATGCAAGCC
GATGAGCGCA TGGTGGTTTT TGGTGAAGAT GTGGGTCACT TTGGTGGGGT ATTTCGCGCC
ACTTCCGGTC TTCAAGAAAA ATTCGGTCGC GATCGCTGTT TTAATACCCC GCTGACAGAG
CAAGGTATTG CCGGTTTTGC CAATGGTTTA GCCTCAAATG GCATGACTGC TGTGGCTGAA
ATCCAATTCG CCGATTATAT CTTTCCGGCG TTCGATCAAA TCGTCAACGA GTCGGCTAAG
TTTCGTTACC GCAGCGGTAA TGAGTTCGAT GTCGGTGGAT TAGTGTTCCG TACGCCCTAT
GGCGGCGGTA TCGCGGGCGG CCATTATCAC TCTCAATCAC CCGAAGCTTA TTTTACCCAG
ACACCGGGAT TAAAAGTGGT GGTGCCACGT AACCCTGAGC AAGCCAAAGG TCTGCTGTTG
GCGTCAATCC GTGACAAAAA TCCGGTGATC TTCTTTGAGC CTAAGCGTTT ATATCGTGCA
TCGGTTGGCG AAGTGCCAGC GGGCGATTAT GAAATTGAAC TGGGTAAGGC TGAAGTGGTT
CGCGAAGGTA AAGACATCAC CTTAGTGGCG TGGGGCGCGC AAATGGAAAT CCTTGAAAAA
GCCGCCGACA TGGCCGCTAA AGAAGGGATC TCCTGTGAAG TTATCGATTT ACGCACCTTG
TCACCCTGGG ATATCGATAC CGTTGCCGAT TCAGTCAAAA AGACCGGACG TTTACTGGTT
AACCATGAAG CGCCATTAAC CGGTGGTTTT GCTGGTGAGA TAGCGGCGAC GATTCAGCAA
GAATGCTTCT TGTATTTAGA GTCACCCATC AGCCGCGTTT GTGGTTTAGA TACCCCGTAC
CCACTCATTC ATGAAAAAGA ATACATGCCA GATGCATTCA AAACGTTTGA AGCCATCAAA
GCATCAGTGA CCTTCTAG
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| Protein sequence | MAEMNMLQAV NEALSIAMQA DERMVVFGED VGHFGGVFRA TSGLQEKFGR DRCFNTPLTE
QGIAGFANGL ASNGMTAVAE IQFADYIFPA FDQIVNESAK FRYRSGNEFD VGGLVFRTPY
GGGIAGGHYH SQSPEAYFTQ TPGLKVVVPR NPEQAKGLLL ASIRDKNPVI FFEPKRLYRA
SVGEVPAGDY EIELGKAEVV REGKDITLVA WGAQMEILEK AADMAAKEGI SCEVIDLRTL
SPWDIDTVAD SVKKTGRLLV NHEAPLTGGF AGEIAATIQQ ECFLYLESPI SRVCGLDTPY
PLIHEKEYMP DAFKTFEAIK ASVTF
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