Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2144 |
Symbol | |
ID | 5369877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2557252 |
End bp | 2558028 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640830356 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001366349 |
Protein GI | 153000668 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000412012 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACTTTG TTTCTACAGG CCAAGGACCC GCAGTACTCT TGATCCACGG CTTGTTCGGC AACCTAGATA ACCTCAAAGG CCTAGGGCAA GTATTAGAAA GCCAGTATCA GGTTATTCGT GTCGATGTGC CCAATCATGG TTTAAGTGAG CATTGGGATG AGATGGATTA CCCTCGTCTC GCCACGGCCA TGGTTGCATT ACTCGACGAA CTGGCTATTG AACGCGCCCA TATAGTGGGT CACTCCATGG GCGGTAAAAT CGCCATGGCG ACGGCGTTAG GCTTTCCAGA GCGCATTATC AGCATGGTTG CAGCAGATAT TGCCCCCGTC GCCTATGAGC CAAGACATGA CTTAGTTTTT GCCGCATTAG AAAGCCTGCC CTTAGAAGGT CATACCGACA GACGCTTTGC CCTTAACCAC TTAATAGACA AAGGTATCGA TGAAGCCACT GCGCAGTTTT TACTCAAAAA CCTGCAGCGT ACCGATACTG GCTTTCGTTG GAAGCTGAAC TTAATTGGGC TAAAGGCTTG TTATCCCAAT ATTATTGGTT GGCACAATCA GGCGCCAAAT CCAGTACAAA GCTATAGCGG CCCGAGTCTA TTTATTCGCG GCGGTGATTC AAATTATGTC ACTGGTGAGC ACAGAAGCGC TATCATGGCG CAATTCCCTG CAGCGCAAGC GAAAACCCTC GAAGGCTGTG GTCATTGGTT ACATGCACAG AAACCCGCCA TCTTTAACCG GATTGTGTCT GAATTTATTG ACAAACAAGC AATGTAA
|
Protein sequence | MNFVSTGQGP AVLLIHGLFG NLDNLKGLGQ VLESQYQVIR VDVPNHGLSE HWDEMDYPRL ATAMVALLDE LAIERAHIVG HSMGGKIAMA TALGFPERII SMVAADIAPV AYEPRHDLVF AALESLPLEG HTDRRFALNH LIDKGIDEAT AQFLLKNLQR TDTGFRWKLN LIGLKACYPN IIGWHNQAPN PVQSYSGPSL FIRGGDSNYV TGEHRSAIMA QFPAAQAKTL EGCGHWLHAQ KPAIFNRIVS EFIDKQAM
|
| |