Gene Shew185_2144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2144 
Symbol 
ID5369877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2557252 
End bp2558028 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content48% 
IMG OID640830356 
Productalpha/beta hydrolase fold 
Protein accessionYP_001366349 
Protein GI153000668 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000412012 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTTG TTTCTACAGG CCAAGGACCC GCAGTACTCT TGATCCACGG CTTGTTCGGC 
AACCTAGATA ACCTCAAAGG CCTAGGGCAA GTATTAGAAA GCCAGTATCA GGTTATTCGT
GTCGATGTGC CCAATCATGG TTTAAGTGAG CATTGGGATG AGATGGATTA CCCTCGTCTC
GCCACGGCCA TGGTTGCATT ACTCGACGAA CTGGCTATTG AACGCGCCCA TATAGTGGGT
CACTCCATGG GCGGTAAAAT CGCCATGGCG ACGGCGTTAG GCTTTCCAGA GCGCATTATC
AGCATGGTTG CAGCAGATAT TGCCCCCGTC GCCTATGAGC CAAGACATGA CTTAGTTTTT
GCCGCATTAG AAAGCCTGCC CTTAGAAGGT CATACCGACA GACGCTTTGC CCTTAACCAC
TTAATAGACA AAGGTATCGA TGAAGCCACT GCGCAGTTTT TACTCAAAAA CCTGCAGCGT
ACCGATACTG GCTTTCGTTG GAAGCTGAAC TTAATTGGGC TAAAGGCTTG TTATCCCAAT
ATTATTGGTT GGCACAATCA GGCGCCAAAT CCAGTACAAA GCTATAGCGG CCCGAGTCTA
TTTATTCGCG GCGGTGATTC AAATTATGTC ACTGGTGAGC ACAGAAGCGC TATCATGGCG
CAATTCCCTG CAGCGCAAGC GAAAACCCTC GAAGGCTGTG GTCATTGGTT ACATGCACAG
AAACCCGCCA TCTTTAACCG GATTGTGTCT GAATTTATTG ACAAACAAGC AATGTAA
 
Protein sequence
MNFVSTGQGP AVLLIHGLFG NLDNLKGLGQ VLESQYQVIR VDVPNHGLSE HWDEMDYPRL 
ATAMVALLDE LAIERAHIVG HSMGGKIAMA TALGFPERII SMVAADIAPV AYEPRHDLVF
AALESLPLEG HTDRRFALNH LIDKGIDEAT AQFLLKNLQR TDTGFRWKLN LIGLKACYPN
IIGWHNQAPN PVQSYSGPSL FIRGGDSNYV TGEHRSAIMA QFPAAQAKTL EGCGHWLHAQ
KPAIFNRIVS EFIDKQAM