Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2135 |
Symbol | |
ID | 5371938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2548141 |
End bp | 2548728 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640830347 |
Product | hypothetical protein |
Protein accession | YP_001366340 |
Protein GI | 153000659 |
COG category | [R] General function prediction only |
COG ID | [COG1896] Predicted hydrolases of HD superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000415566 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTCACT TATTTGCCCA TTTAGCTCGA ATGAAACTTA TCCAACGCTG GCCTTTGATG TACAACGTTC GCACTGAAAA TGTTCAAGAA CACTCGCTAC AAGTCGCCAT GGTGGCCCAT GCACTGGTGA TCATCAGCAA TAAAAAGTTC GGCACGACGC TTGATCCCCA TCAAGCTACA AGTCTGGCGA TTTTCCACGA TGCCAGTGAA ATTCTCACGG GTGACTTACC GACGCCGGTG AAATACTTCA ATAAAGAAAT CGAAGCCGAG TATAAAAAAA TTGAGGCGAT TGCCGAGCAG CGCATGCTGG ATATGGTGCC AGAAGAATTT AAAGAAGATT ATCGCAGTCT GTTCATCAGT GATTACGCCG ATCCCGTTTA CAAGACCATA GTGAAATCCG CTGATACTCT GTGTGCCTAT CTTAAATGTC TTGAAGAAAA CCGCGCCGGC AACAGTGAAT TCAATACCGC CCGTAAACGT CTCGAAGACA TGCTGGCGAC AAATCCTGAT CCCGCAGTAC AGTATTTTAT GAGCTGCTTT GTGCCAAGTT TCACCTTGAA TTTAGACGAA ATTAACAAGA TGCTTTGA
|
Protein sequence | MSHLFAHLAR MKLIQRWPLM YNVRTENVQE HSLQVAMVAH ALVIISNKKF GTTLDPHQAT SLAIFHDASE ILTGDLPTPV KYFNKEIEAE YKKIEAIAEQ RMLDMVPEEF KEDYRSLFIS DYADPVYKTI VKSADTLCAY LKCLEENRAG NSEFNTARKR LEDMLATNPD PAVQYFMSCF VPSFTLNLDE INKML
|
| |