| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2113 |
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| Symbol | |
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| ID | 5372365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2521522 |
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| End bp | 2523528 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640830322 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_001366318 |
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| Protein GI | 153000637 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000859502 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCAGAAT CTGTTTTTCA GCTTGAATCG CAATTCGCCC CCGCAGGCGA CCAACCTACA
GCGATAGCCA AATTAGTCGA TGGACTCGAA GCGGGTTTAG CTTGCCAAAC CTTACTCGGG
GTGACCGGCT CAGGTAAAAC CTTCACGATT GCCAATGTGA TCCAAAAGTT AGGTCGCCCC
ACGATTATCA TGGCGCCCAA TAAAACTTTG GCGGCGCAGC TTTACGGCGA GATGAAAGAG
TTCTTTCCCC ATAATGCGGT TGAGTATTTT GTCTCATACT ACGATTACTA TCAGCCAGAA
GCCTATGTGC CTGCATCAAA TACCTTCATC GAGAAAGACG CGTCGGTTAA TGCCCACATA
GAGCAAATGC GCCTGTCGGC GACGAAGGCG CTATTAGAGC GTAAAGATGT GGTGCTTATC
GCCTCTGTGT CGGCCATTTA TGGTTTGGGC GATCCCGACT CCTATTTAAA AATGTTGCTG
CATCTTCGCC AAGGCGATGT GATGGGGCAG CGTGATATCT TAATTCGTCT CAGTGAATTG
CAGTATAAAC GCAATGATAT CGAGCTACAG CGCGGCACCT ATCGCGTGCG TGGTGAAGTG
ATTGATGTTT TCCCTGCCGA TTCTGAGCGT AATGCCATTC GTGTTGAGTT GTTCGACGAT
GAGATTGAGC GTTTAAGCGA GTTTGATCCG TTAACCGGCC ATATCATCAA GCGCATCGCC
CGTACAACGG TTTACCCTAA GACTCACTAT GTGACGCCGC GGGAAAAAAT CATCGCCGCC
ACTGAGTTTA TTAAAGAAGA GCTGCGCGAG CGTAAGCAAT ATCTACTCGA TAACAACAAG
TTAATTGAAG CCCAGCGTAT CCATGAGCGG GTGCAATACG ATGTGGAAAT GATGGTGGAG
TTGGGTTACT GCTCAGGCAT CGAAAACTAC TCGCGCTATT TGTCAGGCCG CGCACCGGGG
GAAGGGCCGC CAACCTTACT CGACTATTTG CCCGCTGACG GTCTATTAAT TATCGACGAA
TCCCATGTGA CTGTGCCGCA AATCGGCGCC ATGTACAAAG GTGACCGTTC CCGTAAAACC
ACACTGGTGG AATACGGTTT CCGCTTACCA TCAGCCTTAG ATAACCGACC GCTCAAGTTT
GAAGAGTTTG AGCAATTGAT GCCGCAAACC ATTTATGTGT CGGCGACACC GAGTGTCTAC
GAGCTGGAAA AAAGCGAAGG TGAGATTGCC GAGCAGGTCG TACGGCCAAC GGGTTTACTC
GATCCTGAAT TAGAAGTGCG TCCTGTCGGG ACTCAAGTGG ACGATTTATT GTCCGAGATC
GCCAAGCGCG TCGCTGTTAA CGAGCGGGTG TTAGTGACGA CGCTGACCAA GCGTATGTCG
GAGGATTTGA CCGAATACCT CGACGAACAT GGTGTAAAAG TGCGTTATTT GCACTCGGAC
ATAGACACAG TCGAACGGGT GGAGATCATC CGCGATCTGC GTTTAGGCAA GTTTGATGTG
TTGGTTGGGA TCAACCTATT GCGTGAAGGC TTAGACATGC CAGAAGTGTC ACTGGTGTGT
ATTTTAGATG CGGATAAAGA GGGCTTCCTG CGCTCAGAAC GCTCGCTTAT CCAAACCATT
GGCCGCGCCG CGCGTAACGT TAATGGCAAA GTCATTCTCT ATGCTGATCG CATTACCAAT
TCGATGGCGA AGGCCATTGG TGAAACTGAC CGCCGACGTG AACGCCAGCG CGCGCACAAC
TTAAAGCACG GTATCACCCC TAAGGGCGTG GTTAAACGGA TCACCGATGT GATGGATGTC
GATGACGGCC GCGACAGTAA AGCTGTGTAT GGCAAAGTGG CTGAACCTAA GTCCCATTAC
CATAAAGCCG ATGCGACTGA GTTGAGCCAT CAAATCGATC AGCTTGAGAA GAAGATGCAC
GAACATGCGC GTAACTTAGA GTTCGAACAA GCAGCGGCGA TGCGTGATGA AGTCAAGCAT
TTGCGGGACT TGTTGATCAA GGCCTAG
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| Protein sequence | MSESVFQLES QFAPAGDQPT AIAKLVDGLE AGLACQTLLG VTGSGKTFTI ANVIQKLGRP
TIIMAPNKTL AAQLYGEMKE FFPHNAVEYF VSYYDYYQPE AYVPASNTFI EKDASVNAHI
EQMRLSATKA LLERKDVVLI ASVSAIYGLG DPDSYLKMLL HLRQGDVMGQ RDILIRLSEL
QYKRNDIELQ RGTYRVRGEV IDVFPADSER NAIRVELFDD EIERLSEFDP LTGHIIKRIA
RTTVYPKTHY VTPREKIIAA TEFIKEELRE RKQYLLDNNK LIEAQRIHER VQYDVEMMVE
LGYCSGIENY SRYLSGRAPG EGPPTLLDYL PADGLLIIDE SHVTVPQIGA MYKGDRSRKT
TLVEYGFRLP SALDNRPLKF EEFEQLMPQT IYVSATPSVY ELEKSEGEIA EQVVRPTGLL
DPELEVRPVG TQVDDLLSEI AKRVAVNERV LVTTLTKRMS EDLTEYLDEH GVKVRYLHSD
IDTVERVEII RDLRLGKFDV LVGINLLREG LDMPEVSLVC ILDADKEGFL RSERSLIQTI
GRAARNVNGK VILYADRITN SMAKAIGETD RRRERQRAHN LKHGITPKGV VKRITDVMDV
DDGRDSKAVY GKVAEPKSHY HKADATELSH QIDQLEKKMH EHARNLEFEQ AAAMRDEVKH
LRDLLIKA
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