| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2090 |
|---|
| Symbol | |
|---|
| ID | 5370626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 2497361 |
|---|
| End bp | 2498674 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640830299 |
|---|
| Product | SPP1 family phage head morphogenesis protein |
|---|
| Protein accession | YP_001366295 |
|---|
| Protein GI | 153000614 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2369] Uncharacterized protein, homolog of phage Mu protein gp30 |
|---|
| TIGRFAM ID | [TIGR01641] phage putative head morphogenesis protein, SPP1 gp7 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.068009 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAAAC CAAGAGTGCC TAAAACCGTT GATTTAAGCA TTGCCATTAA CCAAGACCCC
GCCGATGCGG TGGCTTATTT TCGTGCCAAA GGCTTTGCAA TCAGTGACGA TTGGCAAGAC
GTGTGGACCC GCGCCCACGC CCGTGCCTTT ACGGTGGCCA AGGCGGCACA GATGGATGTG
CTCACGGCGA TCCGTAATGA AGTGGATGCA GCCCTAAGGC AAGGGTTAAC CGCTAAGCAG
TTTCAGGCAA ACCTTAAACC GCAGCTTGAA AAGCTCGGGT GGTGGGGCAA AAAGGAAGTC
GATGGCCGCG AGGTACAGCT GGGGAGTCCC TACCGCTTAA ACACTATCTA TCGTCAAAAC
CTGCAAACCG CTTACATGGC TGGGCGCTAT CGGCGCATGT TATCGCGCAC TAAAACCCAC
CCCTATTGGC AGTATGTGGC GATAGATGAC GGCCAAACAC GGCCAGCCCA TGCGCGGCTT
AGGGGTAAAG TGTTCCGCTT TGACGATCCA ATATGGGACA TCATTTATCC TCCCAATGGC
TGGGGCTGTC GTTGCCGCGT TCGGGCGCTC ACCGAGGCGC AAGTGAAGGC GATGGGGATC
ACTGTGGAAA ATGGCGAAGG TTATATCCAG CGCTTTGACA CTGAGACAGT CGCGCGCGGA
ACGGGTGAAG TGTTAACCGT GCCCCATGCG CGTATCGATC TGCCCGATGG CAGCAGCATG
AGCCCCGATT TAGGCTGGGC CTATAGTCCA GGCGAAGCCG CCTTTGGTAC CGACGTGGCC
GTCGCTAAAA AGCTTGGCAC TATTCAATCG TTAGACACCC GCGCGCAGTT TATTCAGGCT
CTCAATAATA GCTCGCTGCG CCACGCCCAG TTTGCAAAGT GGACGGATGA AGTCCTTGCC
GCCAATCCAG GACAAAAGCG GCGACCAGGC TTAGGCGTAC AGGCTTTAGG TTTTATGACG
CCCTCGATTC AAGCCGCAGT GACAGCGCGT TTAGGGCGCG AGCCGACAAC CTTACTTGCG
ATAAGGGCGC ATGAGCTTAC AGCAAAAAAC GGGCTTCAAC CTAGTGTGGT AAAGCGATTA
CCTTTGATGT TGACAACACC TGAGGCAGTA ATATGGGACA GCGAAAATCA ACACTTACTG
TATGTGTATC CTGCTGCGGG TGAGAGCAAT GGCAGCAAGA ATAAAGTAAT CATCAATAGC
GCATGGCAGC TAACGCGCCA GCCTAATGAG GGCGAAGTGC AACTACTGAC GTTATCACTG
GCACAATTAC AGCAAGCCCA ATACCAAGTG CTTGAAGGCA AGTTAAGAGG ATAG
|
|---|
| Protein sequence | MPKPRVPKTV DLSIAINQDP ADAVAYFRAK GFAISDDWQD VWTRAHARAF TVAKAAQMDV
LTAIRNEVDA ALRQGLTAKQ FQANLKPQLE KLGWWGKKEV DGREVQLGSP YRLNTIYRQN
LQTAYMAGRY RRMLSRTKTH PYWQYVAIDD GQTRPAHARL RGKVFRFDDP IWDIIYPPNG
WGCRCRVRAL TEAQVKAMGI TVENGEGYIQ RFDTETVARG TGEVLTVPHA RIDLPDGSSM
SPDLGWAYSP GEAAFGTDVA VAKKLGTIQS LDTRAQFIQA LNNSSLRHAQ FAKWTDEVLA
ANPGQKRRPG LGVQALGFMT PSIQAAVTAR LGREPTTLLA IRAHELTAKN GLQPSVVKRL
PLMLTTPEAV IWDSENQHLL YVYPAAGESN GSKNKVIINS AWQLTRQPNE GEVQLLTLSL
AQLQQAQYQV LEGKLRG
|
|---|
| |