| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2063 |
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| Symbol | |
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| ID | 5373223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2473373 |
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| End bp | 2476030 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640830267 |
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| Product | electron transport complex protein RnfC |
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| Protein accession | YP_001366268 |
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| Protein GI | 153000587 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
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| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00525621 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAACTT TATTAGATCA ATTAGATAAA GGAACCCTTT GGCGATCACC CGGTGGAATA
CATCCTCCTG AAGTCAAATT CCTCTCCAAC GCGACGCCGA TTGGCCAACT TCCATTAGCC
TCGACGTACT TAGTGCCTGT CCCTCAAGTT GGTGAAAACT GTACGCTTGC GGTGAAGGTT
GGCGATAGCG TCTTAAAAGG CACGCCACTA ACGCAAGGCA CCTCGATTTG GCATTTACCT
GTGCATGCGC CAACATCGGG CACTATTGTT GCTATCGAAC CAAGGGCGAG CAACCATGCC
TCTGCATTGC CGGTTAACAC TTGCGTTATT GCAGCCGATG GCAAAGACAC CTGGTGCGAG
TTAGTACAAA ATCAACTTGA TGACTTAAGC CATCAGCAAA TCGTTGATAA GGTACGCTCA
GCCGGCATTG CCGGTATGGG CGGCGCAGCG TTTCCGACTC ATATTAAGCT TAATCCGGTC
AGTGAAATCG ATTTAGTCAT CATCAACGGC GTCGAGTGCG AACCTTATAT CAGCGCCGAT
GACAGATTAA TGCGCGAATA TAGCCAAGAT ATCCTCGCGG GTATTGGCAT AATTCATCGA
CTATTAACGC CAAAACGCAT TGTTATCGCC ATTGAAGACA ATAAACCTGA AGCGGCCAAA
GCCATGCAAG CTGCTGTCAG CCAATGCGGA CTCCCAGCGG GCAGCATTCG GGTCACGGTT
ATCCCGACAA AATATCCTTC TGGCGGTGAA AAGCAGTTAA TTCAAATCAT TACTGGCCGC
GAAGTGCCCT CGGGCGCCAT TCCCGCCAAA CTCGGTATCG TGGTACATAA CGTCGGTACT
GCCTATGCAA TTAATCAAGC CGTCACTCAA GGCAAGCCTT TGGTTGAACG CGTTGTGACT
GTGACAGGCA GAAATGTCGG CAAACCAGGG AACTACTGGT TACCGATAGG CACGCCCGTT
GATCACGTTC TGACTGCAAC TGAATTCACG CCAGAGCCTG ACCAAAAGGT GATTATTGGC
GGGCCTATGA TGGGCCATGC GTTAGCGAAT ATCCAAGTGC CTATTTTAAA AGGTACTAAC
TGTATTCTGG TGCCAAGCAG CCAAGAAATT GGTAGCACGC CCGAAGAAAA AGCCTGTATC
CGCTGCGGCG AATGCGCCAC TGCCTGCCCT GCACTCTTGT TGCCACAACA ACTCTTTTGG
CACGCCAAGG CCGAAGAATA CGATAAAGCC GCCAGTTACA ATCTAAAGGA TTGTATTGAA
TGCGGTTGTT GTAGTTACGT TTGCCCGAGT GATATTCCAT TAGTCGAGTA TTACCGCATT
GCCAAATCAG CACTCAAACA TGCCGCCGAT GAGAAGCAGC AAGCAGAGCG CGCCAAACAG
CGCTTCGATG CCCGCTTAGC GCGTCTTGAA GAAGAAAAAC TGGCCCGTGA AACTAAGGCG
AAAGAGGCGT CTGAACGTCG ACAAGCCAGC ATGACAGGCA CAGATAAAAA TGCCGTCGCC
GAAGCCATGG CACGCATCGC CGCGAAAAAA GCCGCAGCGG CACAAGCAGT CACTGGCGAA
TCAATTAACG AAGAGTCAAG CGTCACAACA ACTGACACCA CGGAAGTGCC AAAAGGTAAG
GCCGCAGTTG CCGCCGCCAT CGCCCGTGCT AAAGCGAAAA AAGCAGCCCA AGCAAATGCC
GATGGCACTG ACACCAATGG TGCTGCAACT GACAGTGCTA AAACAGACAA TGCGGTGAAT
ATTGATGCAA ACGACTCCAT CTCAGCAACA GTTGCGATAG CGCAGGAAGC GCCTTCATCC
CAGAAAGACA AAGTCGCTGC GGCAATTGCG CGCGCCAAGG CCAAAAAAGC CGCACAGCAA
ACAGATACCG CGCCGCTTGA ACCTGCAGAA ACCGCTGACA GCACATCAGA GCTCAGCGCT
GCCGATGATA AAAAGGCGAA AGTAGCAGCA GCCGTTGCTC GTGCCAAGGC CAAGAAAGCG
GCGCAGCAAG GAGAAACCGC CGCTAGCGAT ACTGAAGTTA GCAATACTGA CGTTAGCGTT
AATGACGTTA ATGACGTTAA TGATGCTGAA GCGATTAAGA AAGCCAAAGT AGCCGCCGCG
GTTGCCCGTG CTAAAGCGAA AAAAGCCGCC CAACAAGCTG AGACAAATGC TGAAAATGGT
TTAAACCAGA CCGCGACTCC AGCAGTTGAT TCCGCAGCTA ACGTTCAAGC AGTTGTGAAT
GCTGATGCAG AAACCGCTGT TAATGCAGCC GCTACTGATA TTGAAGTTAG CAACACTGAC
GTTAGCGTTA GTGACGCTGA AGCGATTAAA AAGGCCAAAG TGGCTGCCGC AGTTGCTCGT
GCTAAAGCGA AGAAAATAGC GGCTGCATCA GCAGAGTCTA AAACTGAGTC TGAAATAGAG
TCTGTTGACG AGATTCGAGC TGAAGCTAAC GTGGCATCGC CCTCGATAGC AGCAACGCTT
GAGACTGCAA TAACTGGAGC CGAAACCGTT TTGCCATCGG TAGAATCTGC TGCAGAGCCC
ATTGAAACAG CGCCGTTATC CAGTGATGAA CTGAAAAAAG CGCGGATTGC TGCGACCATC
GCCAAGGCAA AAGCCAAAAA AGCGGCACTC GCCCAAGAAG CCAATGCTTC GAGCGACTCA
AGTGTAACTA ATGATTAA
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| Protein sequence | MLTLLDQLDK GTLWRSPGGI HPPEVKFLSN ATPIGQLPLA STYLVPVPQV GENCTLAVKV
GDSVLKGTPL TQGTSIWHLP VHAPTSGTIV AIEPRASNHA SALPVNTCVI AADGKDTWCE
LVQNQLDDLS HQQIVDKVRS AGIAGMGGAA FPTHIKLNPV SEIDLVIING VECEPYISAD
DRLMREYSQD ILAGIGIIHR LLTPKRIVIA IEDNKPEAAK AMQAAVSQCG LPAGSIRVTV
IPTKYPSGGE KQLIQIITGR EVPSGAIPAK LGIVVHNVGT AYAINQAVTQ GKPLVERVVT
VTGRNVGKPG NYWLPIGTPV DHVLTATEFT PEPDQKVIIG GPMMGHALAN IQVPILKGTN
CILVPSSQEI GSTPEEKACI RCGECATACP ALLLPQQLFW HAKAEEYDKA ASYNLKDCIE
CGCCSYVCPS DIPLVEYYRI AKSALKHAAD EKQQAERAKQ RFDARLARLE EEKLARETKA
KEASERRQAS MTGTDKNAVA EAMARIAAKK AAAAQAVTGE SINEESSVTT TDTTEVPKGK
AAVAAAIARA KAKKAAQANA DGTDTNGAAT DSAKTDNAVN IDANDSISAT VAIAQEAPSS
QKDKVAAAIA RAKAKKAAQQ TDTAPLEPAE TADSTSELSA ADDKKAKVAA AVARAKAKKA
AQQGETAASD TEVSNTDVSV NDVNDVNDAE AIKKAKVAAA VARAKAKKAA QQAETNAENG
LNQTATPAVD SAANVQAVVN ADAETAVNAA ATDIEVSNTD VSVSDAEAIK KAKVAAAVAR
AKAKKIAAAS AESKTESEIE SVDEIRAEAN VASPSIAATL ETAITGAETV LPSVESAAEP
IETAPLSSDE LKKARIAATI AKAKAKKAAL AQEANASSDS SVTND
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