Gene Shew185_2054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2054 
Symbol 
ID5371873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2465164 
End bp2466720 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content47% 
IMG OID640830258 
Producthypothetical protein 
Protein accessionYP_001366259 
Protein GI153000578 
COG category[S] Function unknown 
COG ID[COG1322] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0154477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATTTT CTCAATCTTT TTCCGTCGCC GAAATCATCG GCCTTCTCGC CATTGCATTC 
TTAGGCCTGT TGATCGGTGC CCTGCTCAAT CAAAGACTCA CGCGCCAACG TTGGCAACAA
CATAAAGATC AACTTGAGCA AGAGATGCGT CAAGTGAATG AAGATGCTGA ATTATCCTTA
GCACAACAGC AAATTTTGGT TGATGACAAA GAGGCGCAAC TGCGCCAATA CCAGCAGCGC
CTTGAGCTCA AAATTGAACA ATTAGGTAAA GCCGAGGCCT TAGCCGAACG TGTACCCACC
TTAGAGCAAC AATTGAATGA CAGCCAGCGC CGTCAGTTAG AAATTCAATT GGCGCTGTCG
AAATCCAATG CCATGCAGCA AACCATTCAA GCCAAGGCCG ATGCCCAGCA AGAATCACTA
CAGGATAAAA TCGCTAGCTT AGAATCGGCC GAAGTGCGAT TAAAGACCCA ATTTGAAAAC
CTCGCCAATC GCATTTTTGA AGAACGTAGC GAAAACTTTA AGCATCAAAA TGCCAGCCAA
CTCGAAGGCG TGCTTGGGCC ATTGAAACAA CAGCTTGAAG GATTCAGACA ACAAATTCGT
GAATCCTACA CCCACGAACA GTCCGAGCGC AGCGCCCTTA AACATCAACT TGAGCACCTG
CGAGATCTCA ATCTGAAGAT GAGCCAAGAT GCAATCAACC TGACCAAAGC GCTTAAAGGT
GATAACAAGC AGCAAGGTAA CTGGGGTGAA GTGATCCTCG ATCGCGTCCT GCAGGAAAGC
GGCCTACGCG AAGGCCATGA GTACCATACC CAACAAGAAC TCAAGGATGA CAATGGTAAG
CGCTTTAAGC CGGATGTGAT TGTGCATCTG CCAGAAAATA AAGACGTGGT CATCGACGCT
AAAATGTCCT TGGTCAGTTA TGAGCGCTAC TTCAACAGTG AAGATCCTGC CCTACGCCAA
CAGGCGATTA ATGAGCATGT GATCTCGATT CGCAGCCACA TTAAAGGCTT AAGTCAAAAG
GATTATCAAA ATCTGCACGG GCTTAAGAGC CTAGATTATG TGTTGATGTT TATTCCTATT
GAACCGGCAT TTTTACTGGC GTTAGAGCAT GACCCTAGCC TAGTGAATTT CGCTCTTGAG
CAGAATATCA TGTTGGTAAG CCCGACGAAT TTACTGGTAG CCCTGCGCAC CATTAACAAC
ATTTGGCGCT ACGAATATCA AAACCAACAT GCGCAAACCA TTGCTAAGCA AGCGGGTCGA
ATTTACGACA AGTTATGTGG TTATATTGAA GACATGGAAA AACTCGGCCG CGCCTTAGAT
AACGCCGAAA AAACCTATCA CAGCGCCATG AACAAGCTGT CATCGGGCAA AGGCAATCTA
GTGCGTCAAG CCCACTTAAT GCAGCAACTC GGGGTCGATA CCAGTAAACA GCTGGATAAA
ATGCTATTAG AAAAAGCGCT TAATGAAGCC CAAGACGACA ACGATACACA GGATGACGCG
GAGCAGACGC TGCCGCCAAC GCGCGATCCT AAGGACACAG AACTCGAACC CGCATAA
 
Protein sequence
MPFSQSFSVA EIIGLLAIAF LGLLIGALLN QRLTRQRWQQ HKDQLEQEMR QVNEDAELSL 
AQQQILVDDK EAQLRQYQQR LELKIEQLGK AEALAERVPT LEQQLNDSQR RQLEIQLALS
KSNAMQQTIQ AKADAQQESL QDKIASLESA EVRLKTQFEN LANRIFEERS ENFKHQNASQ
LEGVLGPLKQ QLEGFRQQIR ESYTHEQSER SALKHQLEHL RDLNLKMSQD AINLTKALKG
DNKQQGNWGE VILDRVLQES GLREGHEYHT QQELKDDNGK RFKPDVIVHL PENKDVVIDA
KMSLVSYERY FNSEDPALRQ QAINEHVISI RSHIKGLSQK DYQNLHGLKS LDYVLMFIPI
EPAFLLALEH DPSLVNFALE QNIMLVSPTN LLVALRTINN IWRYEYQNQH AQTIAKQAGR
IYDKLCGYIE DMEKLGRALD NAEKTYHSAM NKLSSGKGNL VRQAHLMQQL GVDTSKQLDK
MLLEKALNEA QDDNDTQDDA EQTLPPTRDP KDTELEPA