Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2048 |
Symbol | |
ID | 5372262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2453685 |
End bp | 2457497 |
Gene Length | 3813 bp |
Protein Length | 1270 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640830252 |
Product | exodeoxyribonuclease V, gamma subunit |
Protein accession | YP_001366253 |
Protein GI | 153000572 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAAGT TAATCCAGTC CAATCAGATG GAAGTGCTCT GCGCCCATTT AGCCGCTTAC CTGACCCAAC CCCTTGCTTT TGCACGTCTA CTGAGTAACG AGCATATTCT GGTGCAGAGT CCCGGCATGT CGACTTGGCT GCGCCTCGAA ATCGCCAAAC AAAATGGGAT TGCTGCCGCA TTGGAATTCC CACTGCCGTC GAGCTTTACC TGGCAGTTGT GCCATGACTT ATTACCCGAT GTGCCCAAGG ACAACGCCTT CACTAAGGCG GCGATGACGT GGAAGCTGAT GCAACTCTTG CCGCGCATGT TACAAGATGA CGCCTTTGGG CCATTGAGAC ACTATCTAGG TAATACCCTA GAAAATACGC CCACCATAAA TACCGCCGAC ACGTGTGAAC ATCTCAACAC CAGTGATATG ACGGCTGACG ACATTAAGCT GTACCAACTC TGTGGCCGGA TTGCCGATAT CTTCGACCAA TACTTAGTGT ATCGGCCCGA TTGGATTTTA GCGTGGGAGC AAAACGAGCA TCCCGACTCA CTCACCAAAT CGCTGAATGA AGACCAACGC TGGCAACCTA TTTTATGGCG CGCGCTCATT GCCTTTAACC GTGATGAGCT TAATCAAAGC CATTACCACA GGGCTAACCT GCACAGTGAC TTGATTGCCG CGCTGAATAA CCCCGACACG TCACTCGCCC AATTGCCACA ACGCTTATTT GTGTTTGGCA TTTCCTCAAT GGCGCCGCAA ACCCTTGAGG TGCTGTACCA TCTGGCAGGC CGTATCGATG TGATCGTGCT TGGTTTAAGC CCGTGTCAAC ACTATTGGGG CGACATTGTT GATCCCCGTA ATCGTGCCCG CATGGCGGTG CAATATGCGG GTAAACGCCA ATTAGCCGAA CTGTGGGAAG AAAAACTCGA AGTGGGCAAT CCGCTGCTTG CCAATAACGG CAAGATGGGC CGTGAATTAC TCGATATGCT GCTTGAGCTC CCCGCCGAAC ACTGCGACTT TGGCGACGAT GTGTATTGTG AACCCTGCGA CGATCCCAAC GATCCACACA GTCATGCCAG CATGCTCCAC GGGGTGCAAT ACGATATTTT AGAGATGCAA ACCTTAGACA GAGTGCTAGG GCCAGATGCC GAGCTGTACC AAAATGTCGA GAACAGACGC CTGTTTAAGC GCGACGATCA ATCCATTCGA GTCAAGAGTT GTCACAGCCC ACTGCGGGAA GTCGAAACCC TGCACGATCA CTTGCTTGAG TTACTCAGCA ACCATGCCGA CCTGACACCC AAAGACATAG TGGTGATGAT GCCCGATGTC GCCGCCTACG CGCCCTACAT CGATGCCGTC TTCTCGGCGA AGCAAGGCCT GCATTACATT CCCTACGCCA TTGCCGACCG CGGCGCGGCG CAGGAATCAC CGCTCATCAA TAGCTTTTTG AATTTACTTG GGATTAATCA AAGTCGTTTT GGTCTGACCG ACATTTTGAG CATACTCGAA GTACCCGCCA TTTTGCGCCG TTTCCAGCTC GATGACGATG AATTGCAACT GATCCGCCGC TGGTTAGATG AAGCGGGCGT GCGCTGGGGC CGAAATGAAC AAAGCCGCCT AAAACAAGGT GTGCCAGCGT TTGAGCAAAA CTCCTGGGCC TTTGGTATTA AAAGGCTGAT TTTAGGCTAC GCCTTGAGTG ACGATGCGCC GCTGTACCAA GACCATCTGA TCGTGACTGG CATCGAAGGC CAATCGGCGC AGGCATTAGG TAAGTTACTC AATTTTATTG AAGTACTCGA TGAAACGGCG CAAATACTCG CCTTACCGCA AGTGGGCGCC CTGCGCTTAG CGGAATTAAC TGAGTTGCTG GATGCCTTCT ACGACACAGA TGAAGACGAG CGCGAGCAGT TACAGGAAAT CCGCGATGCC ATTGCCGCCC TAGAGCAAGA GTTACTATCA GCGGGCAAGC CATTAGATAC AAACTCGTTA GATACAAGTA TGTTCGTGAC ACTAGCCCAA CAGAGCATAA GCGGACTGAG CCTCAGTATC GAAGTGCTAC AACAATGGTT TAATCAACGC TTAACCGAAT CTCGGGTCGG CCAGCGTTAT CTTGCGGGAA GCGTGAACTT TTGTACCTTG ATGCCGATGC GCTCGATCCC CTTTAAGATC GTGTGTTTAC TCGGCATGAA CGATGGGGTT TATCCTAGGG TTCAGCATCC TGTCGGCTTT GATTTAATGG CGCACTTTGG TGCCCGTAAA GGCGATCGTT CCCGCCGCCT CGATGACAGA TATTTGTTTT TAGAAGCCTT ATTGTCGGCG CGCGAGCAAC TGTATATCAG CTATATCGGT CGCAGCGAAC GGGATAACTC TGAGCGTATC GCCTCTATGC TCGTCTCTGA ACTGATTGAA TATTGTCAGC TGTGCTATTT GCCTGAATCG CTATTGGCTC AATCGCAGAA AGCTTCAAGC CCCATAGACC CAGAAGATGC TGAAAAAGCC CTCTATAACG CGATCGTCAG CCACCAGCCG CTGCAACCCT TCGATCCTAA GTTGTATCAA GCCGCAGTAA AAAGTGATGA CGAAAATAGC TCAAAAATAG ATGGCTCAAG CATAAGTAAA AATGAGTCAG GCATAGGCCA AAGTTACAGC CAGCAATGGT GTCCGCCCAA TGCGGACGCT GCGGGCACAC ATGCAGGCCG CTTTATCGGC GCGCAAACTC GCATCATGCT CGAAGCGGAT GAGCAAGACT CAATGCCAGA TACAGAGGCA CAGCCCGCTT CTGTGCGCGA ACAACAGCAA AGCAAGCAAG TGGATGTGTC TGCCCTGATC CGTTTCTTTC GAAATCCGGC GCAGTACTTC TTCAACCGAA CGCTTAAAGT CGACCTTAGT CTTAATATTC AGGCAGATGA TAATGACGAG CCCTTTAGCC TAAATGCCCT AGAGCGCTAT ATGTTACAGG CCCAGTTACT CGACGATGCC ATAGGCCAAG GTCTGACTGA GCCCGATATC GAGCTGATTA AACGCCTCAA AGCCAGCGGC AGTTTGCCGA TGCAGCCCTT CGATGATTTG CTGCTACGCC AATATCAGCA CGATATTAAG CCTTTGATTG GCAGAACCTT GTTCCTCAAG GGAGAACAAG CCAGCAGTCA TGCGGATATT AAACTCCTGT TTGACTTACC CATCACGGCG GGTAAATCCC AGCAAGTGTT ACTGCAAGGC CGTATTGATG ACATCAGCCC TAAGGGATTA GTGAATTACC GTCCCGGTAG CGCCCACGGC CGCGATGTGC TGAGGTTATA CCTTCGCCAC CTGTGTTTAA TGGCAATGGG CCACACACAT GCAAGCTATC TACTCGACAT GGGGCATTTC CACGCCTTAG CGCCAATCAC AGCTGAGCGC GCCCATGCGT TACTGGCCGA TTTGCTGGTG CTGTTTTATC AAGGTCAGCA ATACCCACTG TGTTTTATGC CGCGCACCTC ACTGGCCTAC GTCAGCAGCG AGGGTGAGCA CGATGAGCGT TTGCAGCAAG CGTTACCTGA ATGGCTGGAT GAGCAGAGTC AATTAGGTGA AGGGAACGAG CCCCATTACC AACGCTTATT CAGTTTTCCG CGGGATTTCT CTGAGAATAG CTTTGGCGTA TTAGCCGAGC GCATCTATCG CCCTATGGTG AGTTTATATC TCAAAGATAC GCTGGCTCAG CTTGAGGAAT TTGCGCTGAA CGATGGCATG AGCCAAGGCC AAACTCCCAA TGTACAAGCG ACTGAAACAC ACGCTACTGC AGCACATTTA AACCGCGATA GCGCACAGGG AGAGCAAGCA TGA
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Protein sequence | MLKLIQSNQM EVLCAHLAAY LTQPLAFARL LSNEHILVQS PGMSTWLRLE IAKQNGIAAA LEFPLPSSFT WQLCHDLLPD VPKDNAFTKA AMTWKLMQLL PRMLQDDAFG PLRHYLGNTL ENTPTINTAD TCEHLNTSDM TADDIKLYQL CGRIADIFDQ YLVYRPDWIL AWEQNEHPDS LTKSLNEDQR WQPILWRALI AFNRDELNQS HYHRANLHSD LIAALNNPDT SLAQLPQRLF VFGISSMAPQ TLEVLYHLAG RIDVIVLGLS PCQHYWGDIV DPRNRARMAV QYAGKRQLAE LWEEKLEVGN PLLANNGKMG RELLDMLLEL PAEHCDFGDD VYCEPCDDPN DPHSHASMLH GVQYDILEMQ TLDRVLGPDA ELYQNVENRR LFKRDDQSIR VKSCHSPLRE VETLHDHLLE LLSNHADLTP KDIVVMMPDV AAYAPYIDAV FSAKQGLHYI PYAIADRGAA QESPLINSFL NLLGINQSRF GLTDILSILE VPAILRRFQL DDDELQLIRR WLDEAGVRWG RNEQSRLKQG VPAFEQNSWA FGIKRLILGY ALSDDAPLYQ DHLIVTGIEG QSAQALGKLL NFIEVLDETA QILALPQVGA LRLAELTELL DAFYDTDEDE REQLQEIRDA IAALEQELLS AGKPLDTNSL DTSMFVTLAQ QSISGLSLSI EVLQQWFNQR LTESRVGQRY LAGSVNFCTL MPMRSIPFKI VCLLGMNDGV YPRVQHPVGF DLMAHFGARK GDRSRRLDDR YLFLEALLSA REQLYISYIG RSERDNSERI ASMLVSELIE YCQLCYLPES LLAQSQKASS PIDPEDAEKA LYNAIVSHQP LQPFDPKLYQ AAVKSDDENS SKIDGSSISK NESGIGQSYS QQWCPPNADA AGTHAGRFIG AQTRIMLEAD EQDSMPDTEA QPASVREQQQ SKQVDVSALI RFFRNPAQYF FNRTLKVDLS LNIQADDNDE PFSLNALERY MLQAQLLDDA IGQGLTEPDI ELIKRLKASG SLPMQPFDDL LLRQYQHDIK PLIGRTLFLK GEQASSHADI KLLFDLPITA GKSQQVLLQG RIDDISPKGL VNYRPGSAHG RDVLRLYLRH LCLMAMGHTH ASYLLDMGHF HALAPITAER AHALLADLLV LFYQGQQYPL CFMPRTSLAY VSSEGEHDER LQQALPEWLD EQSQLGEGNE PHYQRLFSFP RDFSENSFGV LAERIYRPMV SLYLKDTLAQ LEEFALNDGM SQGQTPNVQA TETHATAAHL NRDSAQGEQA
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